Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 Y_RNA.654-201ENST00000497848 106 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 HMGB3P3-201ENST00000510526 400 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 SNORD60.2-201ENST00000516883 86 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 AC087854.1-201ENST00000519706 414 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 AP000763.2-201ENST00000540641 163 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 AC018630.3-201ENST00000542637 96 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 MIR5007-201ENST00000583098 95 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 AL162413.1-201ENST00000603198 110 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 AC009314.1-201ENST00000603871 304 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 ELOCP5-201ENST00000604924 333 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 MIR6852-201ENST00000621699 66 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 RNU1-23P-201ENST00000363361 144 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 RNU4-40P-201ENST00000364351 143 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 U3.13-201ENST00000364804 214 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-38P-201ENST00000384085 107 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AL591034.2-201ENST00000402839 359 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 EDDM3CP-201ENST00000415977 425 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 RPS15AP28-201ENST00000435088 386 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 USP9YP8-201ENST00000441913 500 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-333P-201ENST00000459117 107 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-835P-201ENST00000516974 104 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 HMGB1P33-201ENST00000563485 527 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AC092747.3-201ENST00000603769 301 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AC241585.2-209ENST00000638217 143 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 AC099654.12-201ENST00000639868 649 ntBASIC2.59□□□□□ -1.99
BLOC1S4Q9NUP1 CALM2P3-201ENST00000400429 449 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 RNU6-648P-201ENST00000410190 107 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 RNU2-32P-201ENST00000411193 191 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 AC016907.1-201ENST00000419483 435 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 AC078809.1-201ENST00000427601 140 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 CBX3P6-201ENST00000430257 527 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 MTCO2P3-201ENST00000442543 421 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 AC019235.1-201ENST00000503847 207 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 RNU6-506P-201ENST00000516553 94 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 SNRPGP17-201ENST00000603780 214 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 AC018889.1-201ENST00000605372 397 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.58□□□□□ -2
BLOC1S4Q9NUP1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AC092268.1-201ENST00000342691 405 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 MIR634-201ENST00000385208 97 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 RN7SKP61-201ENST00000410642 295 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 HMGB3P2-201ENST00000411913 584 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AL353752.1-201ENST00000454946 260 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 RPL38P4-201ENST00000502376 214 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 RNU6-1281P-201ENST00000516223 105 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AC022616.8-201ENST00000533569 253 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AC103996.1-201ENST00000555468 102 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 YWHAEP7-203ENST00000622054 312 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 MIR6766-201ENST00000622641 72 ntBASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
BLOC1S4Q9NUP1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 RNU6-142P-201ENST00000384019 107 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 RNU6-43P-201ENST00000384302 107 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 RNU6-692P-201ENST00000384496 107 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 SNORD23.1-201ENST00000408212 104 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 SNAP23P1-201ENST00000433229 246 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms