Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 uc_338.34-201ENST00000617467 174 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 MIR6132-201ENST00000622083 109 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-611P-201ENST00000384276 104 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 Y_RNA.510-201ENST00000384511 114 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AL663109.1-201ENST00000411498 844 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 VN1R108P-201ENST00000431580 830 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 RPS15AP10-201ENST00000432472 382 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AC107032.1-201ENST00000485945 480 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 CYCSP27-201ENST00000527643 293 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AC022616.8-201ENST00000533569 253 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AC090115.3-201ENST00000553218 849 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AC026271.5-201ENST00000577873 130 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 MIR4529-201ENST00000578110 78 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AC104073.3-201ENST00000610942 955 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 HULC.1-201ENST00000612720 240 ntBASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ZCCHC3Q9NUD5 MTND5P26-201ENST00000426018 1752 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-692P-201ENST00000384496 107 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AL606923.1-201ENST00000406616 190 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 RNU2-66P-201ENST00000410650 161 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AC010975.2-201ENST00000427781 588 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 GPM6BP3-201ENST00000442797 145 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AL031274.1-201ENST00000450334 232 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 FDX1P2-201ENST00000450769 375 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AC104383.1-201ENST00000530297 370 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 Z99129.1-201ENST00000612510 255 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AC139792.3-201ENST00000623525 224 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 AC241585.2-209ENST00000638217 143 ntBASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.05□□□□□ -2.08
ZCCHC3Q9NUD5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-1141P-201ENST00000364520 107 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-827P-201ENST00000365553 106 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-259P-201ENST00000383999 107 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-43P-201ENST00000384302 107 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 USP9YP27-201ENST00000418455 438 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 PSPHP1-201ENST00000450062 261 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 AC087884.1-201ENST00000469738 328 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 AC083798.1-201ENST00000472671 131 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 OR11H5P-201ENST00000554039 926 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 AC103996.1-201ENST00000555468 102 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 AC018889.1-201ENST00000605372 397 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 YWHAEP7-203ENST00000622054 312 ntBASIC2.04□□□□□ -2.08
ZCCHC3Q9NUD5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 MIR17-201ENST00000385012 84 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 Y_RNA.597-201ENST00000410463 100 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 RNU4-53P-201ENST00000410828 140 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 CBX3P6-201ENST00000430257 527 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 USP9YP14-201ENST00000430663 563 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 SNAP23P1-201ENST00000433229 246 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 IFNA20P-201ENST00000436840 528 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 DNAJC19P4-201ENST00000440115 345 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 MTND2P22-201ENST00000444325 1033 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 HMGB1P35-201ENST00000503360 598 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AC022447.4-201ENST00000504053 364 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AC107222.1-201ENST00000510899 637 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 MIR4672-201ENST00000583126 81 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AC007229.1-201ENST00000590455 412 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AC009314.1-201ENST00000603871 304 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AC107304.1-201ENST00000604229 296 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AC004908.3-201ENST00000610248 625 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 SCARNA15.3-201ENST00000626315 122 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 SCARNA4.1-201ENST00000628597 123 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 AP000560.1-201ENST00000624150 1937 ntBASIC2.03□□□□□ -2.08
ZCCHC3Q9NUD5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
ZCCHC3Q9NUD5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 SNORD32A-201ENST00000364805 84 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 MIR518A2-201ENST00000384966 87 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms