Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 SNORA38-201ENST00000363946 132 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 RNA5SP125-201ENST00000364843 120 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 RNU6-38P-201ENST00000384085 107 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 SNORD115-47-201ENST00000391226 86 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 CYCSP48-201ENST00000417124 323 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 AC138623.1-201ENST00000418060 216 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 MTCO1P20-201ENST00000425366 358 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 MTND1P34-201ENST00000438556 671 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 CYP2C59P-201ENST00000457790 269 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 RNU6-333P-201ENST00000459117 107 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 SNORA25.11-201ENST00000515935 105 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 COPS8P3-201ENST00000526024 482 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 AL138963.2-201ENST00000605137 226 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 U2.17-201ENST00000611454 95 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 AC090517.2-201ENST00000614966 680 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 uc_338.15-201ENST00000615470 191 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 AC009831.4-201ENST00000620744 325 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 YWHAEP7-203ENST00000622054 312 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 MIR1321-201ENST00000637766 79 ntBASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 RNU6-529P-201ENST00000363383 104 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 RNU4-12P-201ENST00000365233 139 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 MIR186-201ENST00000384988 86 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 AL606923.1-201ENST00000406616 190 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 RNU2-63P-201ENST00000410792 194 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 MTND3P16-201ENST00000452205 344 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 AC087884.1-201ENST00000469738 328 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 AC008413.1-201ENST00000511864 177 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 AC069113.1-201ENST00000517763 267 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 MTND4P7-201ENST00000523876 130 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 AC091544.4-201ENST00000555268 342 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 Z82243.1-201ENST00000609432 473 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 AC064859.1-201ENST00000624741 174 ntBASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.83□□□□□ -1.96
SMC4Q9NTJ3 Y_RNA.6-201ENST00000362350 114 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 RNU1-91P-201ENST00000364746 163 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 Y_RNA.450-201ENST00000384198 113 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AC008267.5-201ENST00000424928 265 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AL356320.1-201ENST00000429616 163 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AC007969.2-201ENST00000441891 191 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AC013470.1-201ENST00000453438 462 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 MTCO3P38-201ENST00000468910 766 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 TRBV12-1-201ENST00000479785 344 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AP005902.1-201ENST00000521358 186 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 MTND1P35-201ENST00000526739 508 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AC090115.3-201ENST00000553218 849 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 AC002044.1-201ENST00000606707 158 ntBASIC2.82□□□□□ -1.96
SMC4Q9NTJ3 RNU6-105P-201ENST00000363909 104 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 RNU6-266P-201ENST00000364225 107 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 Y_RNA.378-201ENST00000365652 113 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 MIR1261-201ENST00000408659 82 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 AC007064.1-201ENST00000412238 351 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 SNORD56-201ENST00000413522 71 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 USP9YP27-201ENST00000418455 438 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 AL121601.2-201ENST00000438019 707 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 AC092989.1-201ENST00000481235 277 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 VN1R107P-201ENST00000601784 209 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 AL713866.2-201ENST00000603579 219 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 AC123912.5-201ENST00000605470 343 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 AC007792.1-201ENST00000623023 402 ntBASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SMC4Q9NTJ3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 MTND4P5-201ENST00000435821 1374 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-37P-201ENST00000362692 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 SNORD56.1-201ENST00000362913 68 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-451P-201ENST00000362921 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNY4P14-201ENST00000363656 96 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-82P-201ENST00000363970 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-11P-201ENST00000364234 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU4-66P-201ENST00000365199 138 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-25P-201ENST00000383873 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-1-201ENST00000383898 107 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 577.1 ms