Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 HSPE1P13-201ENST00000451143 297 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AP000797.1-201ENST00000478870 387 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AL163195.1-201ENST00000496941 348 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 MTND3P25-201ENST00000509243 135 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-1098P-201ENST00000516772 96 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 SNORA31.16-201ENST00000516773 139 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-856P-201ENST00000516959 98 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC087883.1-201ENST00000551882 391 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC090888.2-201ENST00000559765 1144 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 MIR4255-201ENST00000579351 72 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC008521.1-201ENST00000587471 187 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC040896.1-201ENST00000613819 479 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC136475.10-201ENST00000620253 385 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 MIR6758-201ENST00000620653 63 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 HSBP1P2-201ENST00000299671 229 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RNA5SP289-201ENST00000362332 137 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RNU1-76P-201ENST00000362903 159 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 SNORD114-2-201ENST00000363953 78 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-7-201ENST00000364784 107 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-8-201ENST00000365467 107 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-438P-201ENST00000365561 103 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-39P-201ENST00000384344 107 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 SNORA24.1-201ENST00000384401 135 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 SNORA26.3-201ENST00000391119 136 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 PTMAP2-201ENST00000397627 327 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RN7SKP61-201ENST00000410642 295 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RNU2-64P-201ENST00000411315 191 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AC010099.3-201ENST00000423896 409 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 MTCO3P29-201ENST00000432119 779 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AC073910.1-201ENST00000445047 438 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 MTND1P18-201ENST00000448191 573 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RBBP4P6-201ENST00000508098 202 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 HSPE1P23-201ENST00000509838 286 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RN7SKP49-201ENST00000516675 260 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-250P-201ENST00000516958 103 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 ZNF519P3-201ENST00000557158 1032 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AC109446.1-201ENST00000566172 220 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 MIR1273D-201ENST00000577266 86 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AC107304.1-201ENST00000604229 296 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AC121334.2-201ENST00000605387 271 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AC105129.3-201ENST00000605455 485 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AL353149.1-201ENST00000610667 244 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AC087241.4-201ENST00000612441 480 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 AL157786.1-207ENST00000627771 695 ntBASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.48□□□□□ -2.33
CDC42SE1Q9NRR8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-527P-201ENST00000363425 104 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-1141P-201ENST00000364520 107 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 SNORD32A-201ENST00000364805 84 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-534P-201ENST00000364877 106 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-692P-201ENST00000384496 107 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-757P-201ENST00000410334 100 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC009963.1-201ENST00000417265 157 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC060773.1-201ENST00000421698 310 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 YME1L1P1-201ENST00000429435 297 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC007395.1-201ENST00000451333 677 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC016550.1-201ENST00000505348 785 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC103851.1-201ENST00000506833 274 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC074250.1-201ENST00000511117 192 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC074344.1-201ENST00000512823 224 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 RNU4-29P-201ENST00000515943 174 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 ZNF321P-202ENST00000550843 495 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC064872.1-201ENST00000604823 1072 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AL158042.1-201ENST00000605338 460 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC008945.2-201ENST00000606056 604 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 PCGEM1.1-201ENST00000613431 131 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC008147.4-201ENST00000617570 1204 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC126177.8-201ENST00000618339 1015 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AL138955.1-201ENST00000622881 1040 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms