Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 Y_RNA.159-201ENST00000363674 87 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 RNA5SP240-201ENST00000365355 128 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 RNU1-148P-201ENST00000384472 162 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 RNU1-57P-201ENST00000384491 166 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 Y_RNA.517-201ENST00000384551 106 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 RNU6-606P-201ENST00000384721 111 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 RN7SKP158-201ENST00000410453 326 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 RNU4-46P-201ENST00000410818 138 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AC008267.5-201ENST00000424928 265 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 MTND1P18-201ENST00000448191 573 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AC006026.2-201ENST00000457376 180 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 RPS3AP17-201ENST00000472594 777 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 CKS1BP2-201ENST00000497342 240 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 MTCO3P9-201ENST00000506989 781 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AC108078.1-201ENST00000508073 725 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AC109329.1-201ENST00000518744 317 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AC073410.2-201ENST00000603240 332 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AL391646.1-201ENST00000603860 190 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AL355297.2-201ENST00000604792 129 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 HULC.1-201ENST00000612720 240 ntBASIC2.17□□□□□ -2.06
HPS4Q9NQG7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 SNORA16B-201ENST00000364674 135 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 RNU6-259P-201ENST00000383999 107 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AC068050.1-201ENST00000394891 380 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 DNAJC19P4-201ENST00000440115 345 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AL161788.1-201ENST00000441805 169 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 CYP2C59P-201ENST00000457790 269 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 MIR4529-201ENST00000578110 78 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AC004223.2-201ENST00000590309 544 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AC007229.1-201ENST00000590455 412 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 RPL30P11-203ENST00000598995 310 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 AL136363.2-201ENST00000604173 851 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 CENPCP1-201ENST00000533085 2578 ntBASIC2.16□□□□□ -2.06
HPS4Q9NQG7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
HPS4Q9NQG7 ZNF680P1-201ENST00000436625 1469 ntBASIC2.15□□□□□ -2.06
HPS4Q9NQG7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.15□□□□□ -2.07
HPS4Q9NQG7 RNU6-1120P-201ENST00000362988 108 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 RNU6-529P-201ENST00000363383 104 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 Y_RNA.296-201ENST00000364930 108 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 RNU5A-6P-201ENST00000384136 116 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 MIR186-201ENST00000384988 86 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 MIR95-201ENST00000385072 81 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 MTATP6P18-201ENST00000417994 673 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.15□□□□□ -2.07
HPS4Q9NQG7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.15□□□□□ -2.07
HPS4Q9NQG7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.15□□□□□ -2.07
HPS4Q9NQG7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.15□□□□□ -2.07
HPS4Q9NQG7 RNU2-53P-201ENST00000516257 147 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 RNU6-295P-201ENST00000516901 104 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 AC090897.2-201ENST00000581715 130 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 AL627230.6-201ENST00000611129 280 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 uc_338.15-201ENST00000615470 191 ntBASIC2.15□□□□□ -2.07
HPS4Q9NQG7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
HPS4Q9NQG7 AC002543.1-201ENST00000299783 1954 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.14□□□□□ -2.07
HPS4Q9NQG7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.14□□□□□ -2.07
HPS4Q9NQG7 RNU6-78P-201ENST00000362897 107 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 SNORD56.1-201ENST00000362913 68 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 Y_RNA.324-201ENST00000365165 102 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 Y_RNA.381-201ENST00000365666 102 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 RNU6-1042P-201ENST00000384204 107 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 RNA5SP390-201ENST00000410191 113 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 OR9R1P-201ENST00000412200 877 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AL139156.1-201ENST00000412785 841 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AL353193.1-201ENST00000421444 268 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.14□□□□□ -2.07
HPS4Q9NQG7 MTCO2P19-201ENST00000427513 598 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AC073464.1-201ENST00000429823 534 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.14□□□□□ -2.07
HPS4Q9NQG7 MTCYBP40-201ENST00000509390 1135 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 LRRC34P2-201ENST00000514850 553 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AC245505.1-201ENST00000556398 224 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AC008536.2-201ENST00000607284 349 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AC015540.1-201ENST00000615828 501 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 AL353997.5-201ENST00000618886 171 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms