Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-6P-201ENST00000606623 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AC063943.3-201ENST00000615562 356 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RMST_4.1-201ENST00000616886 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RNU6-527P-201ENST00000363425 104 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RNU6-743P-201ENST00000364151 106 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RNU4-42P-201ENST00000364738 142 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RNU5E-7P-201ENST00000365290 117 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RNU6-487P-201ENST00000365430 104 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 MIR544A-201ENST00000384855 91 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 MIR454-201ENST00000390180 115 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RNA5SP390-201ENST00000410191 113 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RNU2-32P-201ENST00000411193 191 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 BX510359.4-201ENST00000423750 193 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AL669831.1-202ENST00000428504 417 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RPS6P15-201ENST00000431996 751 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AL358934.1-201ENST00000432346 324 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 HMGN2P3-201ENST00000433603 273 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 HMGN2P5-201ENST00000436882 273 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 GTF2IP13-201ENST00000438487 386 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 MTND1P26-201ENST00000440488 538 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AL360221.1-201ENST00000445989 335 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RNU7-182P-201ENST00000459009 62 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 BET1P1-201ENST00000482276 359 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RPL23AP94-201ENST00000512518 302 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 GNAI2P1-201ENST00000541815 315 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AC040904.1-201ENST00000590850 223 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AC245014.2-201ENST00000603689 287 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AC246785.4-201ENST00000605374 287 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 AC084768.2-201ENST00000622736 221 ntBASIC1.46□□□□□ -2.18
EXOSC4Q9NPD3 RNU6-1097P-201ENST00000363586 107 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 RNU6-108P-201ENST00000365558 107 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 SNORA40.18-201ENST00000391200 128 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 RAP1BP3-201ENST00000407180 549 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 RNU2-9P-201ENST00000410194 145 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 RN7SKP101-201ENST00000411376 320 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 BTF3L4P1-201ENST00000413813 468 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AC007969.2-201ENST00000441891 191 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 KATNBL1P3-201ENST00000443475 909 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 RPL39P29-201ENST00000447779 157 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AC104564.1-201ENST00000493028 407 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AC104136.1-201ENST00000512969 394 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 SNORD27.1-201ENST00000516319 72 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 RNA5SP503-201ENST00000517047 117 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AP005435.4-201ENST00000529514 284 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 MIR4713-201ENST00000582691 75 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AL670379.2-201ENST00000604983 252 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AC104073.3-201ENST00000610942 955 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AC073114.1-201ENST00000612027 490 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AC136475.10-201ENST00000620253 385 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 SEPT14P19-203ENST00000633205 211 ntBASIC1.45□□□□□ -2.18
EXOSC4Q9NPD3 AP000568.1-201ENST00000282964 442 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 RNA5SP126-201ENST00000365092 109 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 RNA5SP212-201ENST00000391223 107 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 CBX3P9-201ENST00000402326 552 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 RN7SKP142-201ENST00000411236 328 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC133104.1-201ENST00000429100 218 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AL591043.1-201ENST00000432461 424 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AL596276.1-201ENST00000434465 418 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 RPL7P54-201ENST00000438336 674 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC006026.2-201ENST00000457376 180 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC087884.1-201ENST00000469738 328 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 RPL23AP63-201ENST00000498752 471 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 MTCO3P7-201ENST00000510008 774 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AP003072.2-201ENST00000527756 676 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AP000763.2-201ENST00000540641 163 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC123912.5-201ENST00000605470 343 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC006566.1-201ENST00000608943 513 ntBASIC1.44□□□□□ -2.18
EXOSC4Q9NPD3 AC009318.2-201ENST00000610917 651 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms