Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL353752.1-201ENST00000454946 260 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AL121594.1-201ENST00000475906 575 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AC096745.1-201ENST00000509945 370 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 MTCO3P7-201ENST00000510008 774 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AC104136.1-201ENST00000512969 394 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AL356057.1-201ENST00000533798 831 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AC091544.4-201ENST00000555268 342 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 MIR4299-201ENST00000577899 72 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 MIR4648-201ENST00000580107 72 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AL391646.1-201ENST00000603860 190 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AC008536.2-201ENST00000607284 349 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AC104073.3-201ENST00000610942 955 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AC009509.4-201ENST00000619202 509 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 Z69720.2-201ENST00000624755 279 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AC090517.3-201ENST00000625170 141 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 AC090582.1-201ENST00000636321 199 ntBASIC1.57□□□□□ -2.16
HMG20AQ9NP66 snoU2_19.1-201ENST00000362361 80 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 U3.13-201ENST00000364804 214 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 RNU5E-7P-201ENST00000365290 117 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 RNU6-487P-201ENST00000365430 104 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 SNORA25B-201ENST00000365507 128 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 RNY3P9-201ENST00000384727 106 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
HMG20AQ9NP66 RAP1BP3-201ENST00000407180 549 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 MTATP6P18-201ENST00000417994 673 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AL353193.1-201ENST00000421444 268 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AL353689.1-201ENST00000438895 199 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC007969.2-201ENST00000441891 191 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC009238.1-201ENST00000442165 424 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC009237.6-201ENST00000446969 424 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC079140.3-201ENST00000511111 550 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC107393.1-201ENST00000512403 346 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HMG20AQ9NP66 RNU2-69P-201ENST00000516061 100 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 RN7SKP219-201ENST00000516825 296 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC107953.1-201ENST00000522216 297 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC118273.2-201ENST00000532092 465 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AP000873.5-201ENST00000533906 236 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AGGF1P4-201ENST00000568249 801 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 RN7SKP299-201ENST00000606679 301 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 AC002044.1-201ENST00000606707 158 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 Z82243.1-201ENST00000609432 473 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 U4atac.1-201ENST00000618345 95 ntBASIC1.56□□□□□ -2.16
HMG20AQ9NP66 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HMG20AQ9NP66 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
HMG20AQ9NP66 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.55□□□□□ -2.16
HMG20AQ9NP66 RNU6-655P-201ENST00000362858 107 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 RNU6-428P-201ENST00000362942 107 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 Y_RNA.77-201ENST00000362962 107 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 U8.2-201ENST00000363156 134 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 RNU6-944P-201ENST00000364023 107 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 RNU6-393P-201ENST00000384475 107 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 RNU6-903P-201ENST00000391270 109 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 RNU2-23P-201ENST00000410545 195 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 RNU4-46P-201ENST00000410818 138 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 POLHP1-201ENST00000411806 470 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 OR9R1P-201ENST00000412200 877 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 EDDM3CP-201ENST00000415977 425 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.55□□□□□ -2.16
HMG20AQ9NP66 TOMM20P4-201ENST00000427861 435 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 AL365400.1-201ENST00000431854 640 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.55□□□□□ -2.16
HMG20AQ9NP66 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 PRPS1P1-201ENST00000445305 876 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 AC098826.2-201ENST00000452011 651 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 AL122001.1-201ENST00000457027 370 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 CYP2C59P-201ENST00000457790 269 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 SCARNA18-201ENST00000459004 134 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.55□□□□□ -2.16
HMG20AQ9NP66 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.55□□□□□ -2.16
HMG20AQ9NP66 RNU6-586P-201ENST00000517265 104 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 IMMP1LP2-201ENST00000552954 492 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.55□□□□□ -2.16
HMG20AQ9NP66 MTND1P15-201ENST00000579262 949 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 AC068790.2-201ENST00000602601 557 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 AC109347.2-201ENST00000610220 349 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 HAUS6P2-201ENST00000433254 2404 ntBASIC1.55□□□□□ -2.16
HMG20AQ9NP66 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 RNU6-527P-201ENST00000363425 104 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 SNORD116-1-201ENST00000384335 95 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 MIR544A-201ENST00000384855 91 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AL079342.1-201ENST00000401460 267 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 RNA5SP390-201ENST00000410191 113 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 RNU2-48P-201ENST00000410694 191 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 CDK8P2-201ENST00000415020 547 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 MTCO2P19-201ENST00000427513 598 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms