Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 SNORA25.15-201ENST00000516487 89 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 RNU5A-4P-201ENST00000516588 111 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC115990.1-201ENST00000526957 301 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC087883.1-201ENST00000551882 391 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC012414.6-201ENST00000568241 401 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC110760.3-201ENST00000598794 467 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC013412.1-201ENST00000610687 192 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC092140.2-201ENST00000618027 521 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AL121890.5-201ENST00000620848 304 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC019226.2-201ENST00000625973 424 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC100821.1-201ENST00000523153 2479 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 RNU6-105P-201ENST00000363909 104 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 MIR483-201ENST00000385070 76 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 SNORA12.2-201ENST00000391040 156 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 Y_RNA.608-201ENST00000410647 95 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 RN7SKP192-201ENST00000411291 327 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 MTCO2P23-201ENST00000425216 680 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 TOMM22P2-201ENST00000430735 237 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AC027119.1-201ENST00000440877 241 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AC243964.1-201ENST00000441814 261 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 UBE2V1P12-201ENST00000503954 474 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 SNORA3.4-201ENST00000515969 96 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 MTND4P33-201ENST00000556706 766 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 HMGB1P33-201ENST00000563485 527 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 AP000811.1-201ENST00000603803 651 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 SNORD98-201ENST00000636377 67 ntBASIC1.16□□□□□ -2.22
VCX3AQ9NNX9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 RNU5F-6P-201ENST00000362979 116 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 MIR504-201ENST00000385065 83 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 RNU6-607P-201ENST00000411283 108 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AL358453.1-201ENST00000422522 250 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AC099677.2-201ENST00000436385 175 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AC010486.1-201ENST00000511793 424 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 MTCO3P28-201ENST00000513351 515 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 RNU6-685P-201ENST00000517088 95 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 RNU6-1220P-201ENST00000517126 108 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 RNA5SP437-201ENST00000517249 129 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AC019176.1-201ENST00000518519 225 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 VN1R80P-201ENST00000597126 338 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AC090578.1-201ENST00000604955 591 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AL078604.3-201ENST00000615580 211 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 Z69720.2-201ENST00000624755 279 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 AC010608.3-201ENST00000625048 527 ntBASIC1.15□□□□□ -2.23
VCX3AQ9NNX9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 MTCO3P41-201ENST00000414801 328 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AL008987.1-201ENST00000415528 237 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 MTCYBP39-201ENST00000437562 491 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 OR2AQ1P-201ENST00000451972 200 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 RNA5SP269-201ENST00000459032 137 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 SNRPGP7-201ENST00000469016 106 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AC068587.2-201ENST00000478386 781 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AC022447.4-201ENST00000504053 364 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AC079140.2-201ENST00000506193 142 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 RPL21P5-201ENST00000554662 472 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AC015720.1-201ENST00000565251 277 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AC008752.3-201ENST00000588113 712 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AL359999.1-201ENST00000604513 294 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 AL121992.2-201ENST00000606262 256 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 MTND4P9-201ENST00000507819 1346 ntBASIC1.14□□□□□ -2.23
VCX3AQ9NNX9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 RNU6-142P-201ENST00000384019 107 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 RNU6-360P-201ENST00000390944 104 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms