Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU6-116P-201ENST00000384042 109 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 MIR10A-201ENST00000385043 110 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AL627311.1-201ENST00000431514 115 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AL365400.1-201ENST00000431854 640 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 SNORD13-201ENST00000459299 104 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 SNORD42A-201ENST00000459584 64 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AC087884.1-201ENST00000469738 328 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AC116562.3-201ENST00000506136 177 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AC108729.3-201ENST00000513484 108 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 SNORA44.1-201ENST00000517031 108 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AP003392.2-201ENST00000527269 208 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AC068587.5-201ENST00000528506 175 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 MIR3683-201ENST00000580847 82 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AC023043.2-201ENST00000589678 1026 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 CYP2C61P-201ENST00000604072 290 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AC121247.2-201ENST00000604776 136 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AL139286.2-201ENST00000606838 396 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AP001506.1-201ENST00000615444 211 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 Y_RNA.164-201ENST00000363709 102 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 RNU6-1210P-201ENST00000363775 107 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 SNORD14B-201ENST00000364533 90 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 SNORD14D-201ENST00000384390 87 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AL627390.1-201ENST00000396055 340 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 RNU2-8P-201ENST00000410727 190 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 RPL21P90-201ENST00000415692 466 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 MTND3P17-201ENST00000416968 344 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 UBE2V1P4-201ENST00000425374 344 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AL358934.1-201ENST00000432346 324 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 USP9YP29-201ENST00000445112 563 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 MTCO3P28-201ENST00000513351 515 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AC117532.1-201ENST00000514638 323 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 RNU1-86P-201ENST00000516108 154 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 RNU1-107P-201ENST00000516617 154 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AC022616.8-201ENST00000533569 253 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AC087883.1-201ENST00000551882 391 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 MIR548AC-201ENST00000585049 88 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AC098848.2-201ENST00000588023 330 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AC040904.1-201ENST00000590850 223 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AL022345.1-201ENST00000607292 135 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 MIR8081-201ENST00000611533 95 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 AC078883.4-201ENST00000623218 367 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TM9SF3Q9HD45 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AC233981.2-201ENST00000611524 1614 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 RNU6-179P-201ENST00000363350 107 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 MIR29B2-201ENST00000385055 81 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AL049545.1-201ENST00000401856 572 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 MIR1283-2-201ENST00000408621 87 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 SRIP3-201ENST00000413200 219 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 CETN4P-201ENST00000432407 469 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 MTCO3P5-201ENST00000433620 714 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 CALM1P1-201ENST00000442082 433 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AC244505.5-201ENST00000443639 207 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AC079448.1-201ENST00000449377 373 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 PRELID3BP1-201ENST00000457142 540 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 RPS29P11-201ENST00000496507 171 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AC104806.1-201ENST00000508720 308 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 MTND3P25-201ENST00000509243 135 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AC008834.1-201ENST00000511612 175 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 PTP4A1P4-201ENST00000512479 322 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 Y_RNA.687-201ENST00000516558 91 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 RN7SKP256-201ENST00000517201 314 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 Z99497.2-201ENST00000603634 310 ntBASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TM9SF3Q9HD45 FARSBP1-201ENST00000435808 1778 ntBASIC1.81□□□□□ -2.12
TM9SF3Q9HD45 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TM9SF3Q9HD45 RNU6-457P-201ENST00000363999 107 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms