Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 BRK1P2-201ENST00000442875 223 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.7□□□□□ -1.98
UPF2Q9HAU5 MTND4P17-201ENST00000470444 350 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 TRBV1-201ENST00000476502 284 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 TRBVA-201ENST00000498804 316 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.7□□□□□ -1.98
UPF2Q9HAU5 RNU6-572P-201ENST00000516724 80 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 RNU6-256P-201ENST00000516747 97 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 RNU1-40P-201ENST00000516816 164 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 RNU1-97P-201ENST00000516872 164 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AP005597.4-201ENST00000526762 229 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AP000763.2-201ENST00000540641 163 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.7□□□□□ -1.98
UPF2Q9HAU5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.7□□□□□ -1.98
UPF2Q9HAU5 MIR5694-201ENST00000581190 76 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.7□□□□□ -1.98
UPF2Q9HAU5 APOOP1-201ENST00000604695 592 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AC046143.2-201ENST00000609789 160 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AL138726.1-201ENST00000614873 333 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AC063943.3-201ENST00000615562 356 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 MIR6132-201ENST00000622083 109 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AC135776.4-201ENST00000624300 1904 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 RNU4-73P-201ENST00000363164 141 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 SNORD113-7-201ENST00000363762 77 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.212-201ENST00000364177 102 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 MIR518D-201ENST00000385014 87 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 RAP1BP3-201ENST00000407180 549 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.623-201ENST00000411128 95 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 VN1R36P-201ENST00000414936 291 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC098614.2-201ENST00000426040 255 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AL358075.3-201ENST00000426289 226 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 MTND3P23-201ENST00000431980 347 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 RPL32P28-201ENST00000443577 397 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 NDUFB1P2-201ENST00000449477 176 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 MTND3P22-201ENST00000510932 243 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 MIR892C-201ENST00000516410 77 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 RNU6-143P-201ENST00000516942 93 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AL391261.3-201ENST00000557194 520 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 MIR5692A1-201ENST00000580523 69 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC023043.2-201ENST00000589678 1026 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 SCARNA15.3-201ENST00000626315 122 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 SCARNA4.1-201ENST00000628597 123 ntBASIC2.69□□□□□ -1.98
UPF2Q9HAU5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UPF2Q9HAU5 MIR412-201ENST00000362142 91 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.111-201ENST00000363248 100 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 RNA5SP68-201ENST00000363885 119 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 RNU6-884P-201ENST00000363889 107 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.324-201ENST00000365165 102 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 SNORD73A-201ENST00000386062 65 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AL590632.1-201ENST00000424289 371 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 HMGB1P9-201ENST00000429856 646 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 RPS3AP52-201ENST00000435639 297 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AC098831.1-201ENST00000440661 216 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AL109933.2-201ENST00000452651 260 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 PPP1R2P5-201ENST00000457256 603 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 RNU6-717P-201ENST00000459076 104 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AC025033.1-201ENST00000463883 194 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 RPL31P41-201ENST00000477967 372 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 RNA5SP148-201ENST00000516527 94 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 RNU6-273P-201ENST00000516937 96 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 COPS8P3-201ENST00000526024 482 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AP005639.2-201ENST00000527592 928 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 POLR3GP2-201ENST00000588366 668 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 AC022140.2-201ENST00000623500 188 ntBASIC2.68□□□□□ -1.98
UPF2Q9HAU5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
UPF2Q9HAU5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.356-201ENST00000365475 113 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 RNU1-73P-201ENST00000383971 164 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 MIR627-201ENST00000384979 97 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 SNORA48.3-201ENST00000391081 134 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 MIR450B-201ENST00000401182 78 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 MIR548K-201ENST00000408406 116 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms