Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 Y_RNA.3-201ENST00000362331 103 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 RNU6-1322P-201ENST00000364309 107 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 SNORA16.1-201ENST00000364597 132 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 Y_RNA.324-201ENST00000365165 102 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 SNORA69-201ENST00000383895 132 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 RNU6-434P-201ENST00000384376 107 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 RNU6-220P-201ENST00000390919 107 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AL133475.1-201ENST00000404414 305 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 RNU6-648P-201ENST00000410190 107 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 FABP5P14-201ENST00000437273 393 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 MED28P2-201ENST00000475771 317 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 MTCYBP40-201ENST00000509390 1135 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 SNORA31.18-201ENST00000517043 134 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 SNORA31.23-201ENST00000517219 133 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AP004607.1-201ENST00000524456 203 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AC079598.5-201ENST00000547460 117 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF41Q9H4P4 RNU6-91P-201ENST00000607774 107 ntBASIC2.16□□□□□ -2.06
RNF41Q9H4P4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.15□□□□□ -2.06
RNF41Q9H4P4 AL359854.1-201ENST00000614203 1594 ntBASIC2.15□□□□□ -2.06
RNF41Q9H4P4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.06
RNF41Q9H4P4 RNU1-72P-201ENST00000362976 153 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 RNU6-1085P-201ENST00000363576 107 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 Y_RNA.481-201ENST00000384373 102 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 MIR147B-201ENST00000390185 80 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 SNORA40.18-201ENST00000391200 128 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF41Q9H4P4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF41Q9H4P4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF41Q9H4P4 SRIP2-201ENST00000428470 166 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 RPL30P4-201ENST00000429309 333 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 AC003989.2-201ENST00000440224 169 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 PRPS1P1-201ENST00000445305 876 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF41Q9H4P4 AC090515.1-201ENST00000465295 476 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF41Q9H4P4 RNU6-506P-201ENST00000516553 94 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 OR11H5P-201ENST00000554039 926 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 AC023824.2-201ENST00000566185 400 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 AC004223.2-201ENST00000590309 544 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 AC025165.5-201ENST00000602802 578 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 SCARNA4-202ENST00000625402 129 ntBASIC2.15□□□□□ -2.07
RNF41Q9H4P4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 MTND4P27-201ENST00000450813 1354 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 Y_RNA.372-201ENST00000365599 102 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 RNU6-38P-201ENST00000384085 107 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 RNU6-622P-201ENST00000384272 103 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 MIR9-3-201ENST00000385084 90 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 SNORA26.9-201ENST00000391322 122 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 SUMO2P12-201ENST00000405924 140 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 RAP1BP3-201ENST00000407180 549 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AC074117.2-201ENST00000417130 397 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 MTND3P21-201ENST00000433774 331 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 RNU6-333P-201ENST00000459117 107 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AC116337.1-201ENST00000509680 687 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 SCARNA3-201ENST00000517097 143 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 MIR4765-201ENST00000585007 77 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 RPS15AP11-201ENST00000594193 385 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AL021997.1-201ENST00000605757 193 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AC002044.1-201ENST00000606707 158 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 AC026585.1-201ENST00000619582 524 ntBASIC2.14□□□□□ -2.07
RNF41Q9H4P4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF41Q9H4P4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNF41Q9H4P4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 Y_RNA.167-201ENST00000363735 109 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 RNU6-487P-201ENST00000365430 104 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 RNU4-20P-201ENST00000365601 151 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 RNU6-483P-201ENST00000384088 108 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 RNU1-52P-201ENST00000384190 164 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 MIR1294-201ENST00000408503 142 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 U6atac.2-201ENST00000408644 118 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 RNU6-908P-201ENST00000410160 94 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms