Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MIR3674-201ENST00000636576 68 ntBASIC4.03□□□□□ -1.76
BHLHE41Q9C0J9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.03□□□□□ -1.76
BHLHE41Q9C0J9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.03□□□□□ -1.76
BHLHE41Q9C0J9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BHLHE41Q9C0J9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
BHLHE41Q9C0J9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BHLHE41Q9C0J9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.03□□□□□ -1.76
BHLHE41Q9C0J9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
BHLHE41Q9C0J9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.03□□□□□ -1.76
BHLHE41Q9C0J9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
BHLHE41Q9C0J9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
BHLHE41Q9C0J9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 AC106871.1-201ENST00000568324 3102 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 RNU1-62P-201ENST00000362599 164 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 RNU6-653P-201ENST00000363074 106 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 Y_RNA.272-201ENST00000364696 102 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 Y_RNA.571-201ENST00000384753 98 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 PTMAP5-201ENST00000393073 333 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 SNORA11-201ENST00000408789 128 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 RNU2-54P-201ENST00000410299 190 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 AL157831.1-201ENST00000426134 473 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 PHBP16-201ENST00000446318 950 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 RN7SL98P-201ENST00000462271 300 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 AC010469.1-201ENST00000463864 576 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 AL592156.1-201ENST00000508758 304 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 MIR3923-201ENST00000579521 83 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 IPO5P1-202ENST00000600039 287 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BHLHE41Q9C0J9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 SNORD74.4-201ENST00000364129 80 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 RNU1-64P-201ENST00000365443 163 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 BMS1P22-201ENST00000414726 313 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 RPL23AP82-202ENST00000427528 469 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 RPL23AP52-201ENST00000439311 478 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 AC069285.2-201ENST00000440210 275 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 RPS4XP13-201ENST00000483219 789 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 RN7SL810P-201ENST00000493031 276 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 RNU6-107P-201ENST00000516643 102 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 IGLVIV-65-201ENST00000517313 360 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.01□□□□□ -1.77
BHLHE41Q9C0J9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 Y_RNA.7-201ENST00000362352 102 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 RNU6-324P-201ENST00000363957 106 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 Y_RNA.343-201ENST00000365354 112 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 RNU6-81P-201ENST00000365608 104 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 SNORA1.3-201ENST00000384676 136 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 RNU5E-9P-201ENST00000411164 104 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 AC009963.1-201ENST00000417265 157 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 PTGES3P4-201ENST00000426243 356 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 AL353748.1-201ENST00000440753 474 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 snoU13.28-201ENST00000459235 104 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 AC103975.1-201ENST00000482506 483 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 RNU1-61P-201ENST00000516107 151 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 MIR4277-201ENST00000578298 84 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 AL020997.2-201ENST00000602607 184 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 AL133393.1-201ENST00000603277 287 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 AL008718.3-201ENST00000610217 321 ntBASIC4□□□□□ -1.77
BHLHE41Q9C0J9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms