Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 SNORA48.11-201ENST00000517015 89 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AC026371.1-201ENST00000551867 419 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AC007375.1-201ENST00000554513 578 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 MIR5194-201ENST00000582634 120 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AP001836.1-201ENST00000604675 523 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 ELOCP5-201ENST00000604924 333 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AL137790.1-201ENST00000634283 177 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 RNU6-1285P-201ENST00000363480 105 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 U3.12-201ENST00000364498 214 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 RNU4-56P-201ENST00000364700 142 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 RNU6-128P-201ENST00000383976 107 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 SUMO1P4-201ENST00000429430 302 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 AC112220.1-201ENST00000434628 355 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 RPL9P9-202ENST00000466501 579 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 AC022447.4-201ENST00000504053 364 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 SCARNA13-201ENST00000516672 275 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 MTND4LP26-201ENST00000518144 282 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 AC079600.2-201ENST00000550076 130 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 AC100830.2-201ENST00000581636 240 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 MIR3136-201ENST00000583498 78 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 AP000907.4-201ENST00000604143 237 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 MIR7106-201ENST00000612419 65 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 U6atac.1-201ENST00000616025 117 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 AL160394.1-201ENST00000624765 724 ntBASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HERPUD2Q9BSE4 AC108206.1-201ENST00000570186 4159 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 RNU6-1252P-201ENST00000363054 104 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 RNU6-694P-201ENST00000364071 147 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 RNU1-91P-201ENST00000364746 163 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 RNU6-867P-201ENST00000364956 107 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 BTF3L4P2-201ENST00000392798 346 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AC078809.1-201ENST00000427601 140 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AL031659.1-201ENST00000447075 539 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AL353752.1-201ENST00000454946 260 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AL139109.1-201ENST00000455491 297 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AC092436.3-201ENST00000511788 257 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 ZNF861P-201ENST00000588126 639 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AC023043.3-201ENST00000593113 385 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 RBM11P1-201ENST00000604951 799 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 CTHRC1P1-201ENST00000605383 469 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AC104458.1-201ENST00000608243 463 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AC007014.2-201ENST00000615581 479 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AC100810.6-201ENST00000638068 285 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 MTND4P23-201ENST00000447723 1363 ntBASIC2.87□□□□□ -1.95
HERPUD2Q9BSE4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AP000560.1-201ENST00000624150 1937 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 Y_RNA.157-201ENST00000363638 102 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 SNORA80A-201ENST00000363922 136 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AP000275.1-201ENST00000411943 390 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AC007064.1-201ENST00000412238 351 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 RPS3P1-201ENST00000456781 192 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AC114801.2-201ENST00000503825 781 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AC016632.1-201ENST00000503994 196 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 RNU6-612P-201ENST00000516909 102 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 RN7SKP256-201ENST00000517201 314 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 MIR3605-201ENST00000583214 100 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 SNORD98-201ENST00000636377 67 ntBASIC2.86□□□□□ -1.95
HERPUD2Q9BSE4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
HERPUD2Q9BSE4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
HERPUD2Q9BSE4 RNU1-112P-201ENST00000364401 164 ntBASIC2.85□□□□□ -1.95
HERPUD2Q9BSE4 SNORD32A-201ENST00000364805 84 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms