Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 BTF3P15-201ENST00000455606 336 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 RNU6-717P-201ENST00000459076 104 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 AC025465.4-201ENST00000513422 638 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 Y_RNA.687-201ENST00000516558 91 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.91□□□□□ -1.94
SIN3AQ96ST3 AC006199.1-201ENST00000548728 219 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 AL049779.4-201ENST00000604500 156 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 Z69720.2-201ENST00000624755 279 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SIN3AQ96ST3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.91□□□□□ -1.94
SIN3AQ96ST3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
SIN3AQ96ST3 RNU6-254P-201ENST00000363377 107 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 SNORD56.5-201ENST00000364281 72 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 CD24P4-201ENST00000382840 243 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 RNU6-831P-201ENST00000384548 107 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SIN3AQ96ST3 AC009161.1-201ENST00000417306 376 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.9□□□□□ -1.95
SIN3AQ96ST3 NDUFA5P4-201ENST00000436704 385 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SIN3AQ96ST3 Z96811.1-201ENST00000445880 108 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.9□□□□□ -1.95
SIN3AQ96ST3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.9□□□□□ -1.95
SIN3AQ96ST3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.9□□□□□ -1.95
SIN3AQ96ST3 AP000763.2-201ENST00000540641 163 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.9□□□□□ -1.95
SIN3AQ96ST3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SIN3AQ96ST3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 AC009248.2-201ENST00000619826 254 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 AC005858.4-201ENST00000623191 700 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 ADAM3A-203ENST00000461344 2157 ntBASIC2.9□□□□□ -1.95
SIN3AQ96ST3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
SIN3AQ96ST3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC138393.1-203ENST00000327086 343 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 RNU6-1252P-201ENST00000363054 104 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 SNORA72.1-201ENST00000363485 129 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 Y_RNA.414-201ENST00000384011 101 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 SNORA32.2-201ENST00000384049 122 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 MTND4P18-201ENST00000447010 465 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC092001.1-201ENST00000453012 261 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 PMCHL2-203ENST00000457791 237 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 UBL5P3-201ENST00000475112 231 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 RPL7P43-201ENST00000478876 753 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 RNU6-581P-201ENST00000516214 105 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AL121579.1-201ENST00000555129 305 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 MIR3942-201ENST00000585264 109 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC005261.5-201ENST00000596280 355 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AL357078.3-201ENST00000607528 618 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC009318.2-201ENST00000610917 651 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC002064.3-201ENST00000623448 346 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC138627.2-201ENST00000624202 601 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AP006437.1-201ENST00000641440 3685 ntBASIC2.89□□□□□ -1.95
SIN3AQ96ST3 AC008669.1-201ENST00000565823 2178 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-37P-201ENST00000362692 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-942P-201ENST00000363002 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-11P-201ENST00000364234 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-25P-201ENST00000383873 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-1-201ENST00000383898 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-48P-201ENST00000384161 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-36P-201ENST00000384172 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-4P-201ENST00000384205 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-5P-201ENST00000384238 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-3P-201ENST00000384314 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-16P-201ENST00000384385 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-15P-201ENST00000384534 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-2-201ENST00000384627 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-29P-201ENST00000384637 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-9-201ENST00000384776 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-33P-201ENST00000384793 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
SIN3AQ96ST3 BX276092.3-201ENST00000424182 230 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 MTCO3P46-201ENST00000425787 232 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 AC009414.1-201ENST00000427200 443 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 AL353572.1-201ENST00000442490 417 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 UBBP3-201ENST00000445497 241 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU7-138P-201ENST00000459479 64 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RPS27P26-201ENST00000494583 239 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SIN3AQ96ST3 AC079140.5-201ENST00000507882 310 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 RNU6-323P-201ENST00000521915 107 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.88□□□□□ -1.95
SIN3AQ96ST3 AL121821.2-201ENST00000556081 394 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.88□□□□□ -1.95
SIN3AQ96ST3 MIR4446-201ENST00000578505 67 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 MIR4298-201ENST00000584380 73 ntBASIC2.88□□□□□ -1.95
SIN3AQ96ST3 AC011712.1-201ENST00000588959 234 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms