Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-910P-201ENST00000390844 107 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 RNA5SP501-201ENST00000410990 112 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 MTCO1P20-201ENST00000425366 358 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 AC026782.1-201ENST00000512952 449 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.49□□□□□ -2.49
CFAP54Q96N23 AC069304.3-201ENST00000603938 1084 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 AP001330.4-201ENST00000604350 154 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 AC078938.1-201ENST00000620993 318 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 HNRNPDP2-201ENST00000406475 478 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.49□□□□□ -2.49
CFAP54Q96N23 Z77249.1-201ENST00000444622 1175 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.49□□□□□ -2.49
CFAP54Q96N23 SUMO2P16-201ENST00000519475 264 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.49□□□□□ -2.49
CFAP54Q96N23 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.49□□□□□ -2.49
CFAP54Q96N23 MTND5P33-201ENST00000571250 1450 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
CFAP54Q96N23 MTND1P20-201ENST00000430341 950 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.49□□□□□ -2.49
CFAP54Q96N23 AC012065.4-201ENST00000602445 679 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 AC006157.1-201ENST00000611750 366 ntBASIC-0.49□□□□□ -2.49
CFAP54Q96N23 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 RNU6-163P-201ENST00000384396 106 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 AL591034.2-201ENST00000402839 359 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 SNORD71-201ENST00000411292 86 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.5□□□□□ -2.49
CFAP54Q96N23 MTCO3P18-201ENST00000440206 761 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 MTCO3P43-201ENST00000440974 771 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.5□□□□□ -2.49
CFAP54Q96N23 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.5□□□□□ -2.49
CFAP54Q96N23 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.5□□□□□ -2.49
CFAP54Q96N23 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.5□□□□□ -2.49
CFAP54Q96N23 SEPT7P5-201ENST00000434048 306 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 SEPT7P4-201ENST00000437076 306 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.5□□□□□ -2.49
CFAP54Q96N23 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.5□□□□□ -2.49
CFAP54Q96N23 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
CFAP54Q96N23 RNU1-131P-201ENST00000458943 161 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 MIR5739-201ENST00000619803 80 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.5□□□□□ -2.49
CFAP54Q96N23 MTND5P17-201ENST00000418405 1603 ntBASIC-0.5□□□□□ -2.49
CFAP54Q96N23 RNU4-79P-201ENST00000362764 141 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 SNORD114-12-201ENST00000365400 75 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 snoU109.2-201ENST00000459316 135 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC105029.1-201ENST00000520250 669 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 FTX_3.1-201ENST00000610451 147 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AL355073.2-201ENST00000612106 557 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC008498.1-201ENST00000613012 531 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 MIR643-201ENST00000385267 97 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 SNORD83B-201ENST00000386745 93 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 RNU6-837P-201ENST00000391056 108 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 SNORA75.2-201ENST00000391138 150 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 MTND1P9-201ENST00000453775 944 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC048334.1-201ENST00000477975 159 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC018868.1-201ENST00000491307 315 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC025423.5-201ENST00000550230 219 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 MIR1246-201ENST00000636535 73 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 RNY1P7-201ENST00000384743 110 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 ZNF886P-201ENST00000450781 723 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AC023442.1-201ENST00000531247 422 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AL353778.1-201ENST00000603149 408 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 AL353765.1-201ENST00000605514 183 ntBASIC-0.51□□□□□ -2.49
CFAP54Q96N23 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
CFAP54Q96N23 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 RPS15AP10-201ENST00000432472 382 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0.52□□□□□ -2.49
CFAP54Q96N23 AC091885.1-201ENST00000506658 268 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.52□□□□□ -2.49
CFAP54Q96N23 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.52□□□□□ -2.49
CFAP54Q96N23 MIR6864-201ENST00000617935 70 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 MIR412-201ENST00000362142 91 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 MIR597-201ENST00000384968 97 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 RNU11-3P-201ENST00000391111 133 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.52□□□□□ -2.49
CFAP54Q96N23 AC091021.1-201ENST00000468051 388 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 AC010587.2-201ENST00000511727 448 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms