Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC138Q96M89 EEF1B2P7-201ENST00000451177 676 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 RPS29P27-201ENST00000463711 170 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 AC140059.1-201ENST00000489238 361 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 MTND5P5-201ENST00000503764 376 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 AC103851.1-201ENST00000506833 274 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 HSPE1P4-201ENST00000550617 308 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 RPL30P11-203ENST00000598995 310 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 MIR8076-201ENST00000611401 83 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 AL161423.1-201ENST00000613700 262 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC138Q96M89 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 AP000560.1-201ENST00000624150 1937 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC138Q96M89 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC138Q96M89 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC138Q96M89 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC138Q96M89 U3.13-201ENST00000364804 214 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 MIR521-1-201ENST00000384902 87 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 MIR517A-201ENST00000385001 87 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 RN7SKP61-201ENST00000410642 295 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 AL133396.1-201ENST00000432048 687 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC138Q96M89 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC138Q96M89 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC138Q96M89 AL121594.1-201ENST00000475906 575 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 RPS27P27-201ENST00000498779 255 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 AIG1P1-201ENST00000503376 148 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 RNU1-54P-201ENST00000517181 120 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 AC124303.1-201ENST00000605703 360 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 AL627309.6-201ENST00000606857 840 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC138Q96M89 AL449363.1-201ENST00000617815 186 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 AC092794.2-201ENST00000620933 563 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC138Q96M89 AC009541.1-201ENST00000438279 2662 ntBASIC3.03□□□□□ -1.92
CCDC138Q96M89 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CCDC138Q96M89 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CCDC138Q96M89 RNA5SP374-201ENST00000362939 125 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 CBX3P9-201ENST00000402326 552 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 MIR548F5-201ENST00000408421 86 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC244670.1-201ENST00000436879 112 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 DAP3P1-201ENST00000441522 278 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 MRPL50P4-201ENST00000446432 475 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 MTND4P18-201ENST00000447010 465 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC107399.1-201ENST00000451226 265 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC016632.1-201ENST00000503994 196 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC091826.1-201ENST00000514065 313 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC007375.1-201ENST00000554513 578 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 MIR5004-201ENST00000579078 107 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 MIR3200-201ENST00000580767 85 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 UBL5P2-201ENST00000583788 219 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC138Q96M89 POLR3GP2-201ENST00000588366 668 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC078795.3-201ENST00000602913 472 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 AC107871.2-201ENST00000612894 502 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 TPTEP1-208ENST00000636884 213 ntBASIC3.02□□□□□ -1.93
CCDC138Q96M89 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC138Q96M89 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC138Q96M89 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC138Q96M89 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC138Q96M89 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC138Q96M89 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC138Q96M89 Y_RNA.184-201ENST00000363884 108 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 Y_RNA.339-201ENST00000365325 102 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 RPL19P1-201ENST00000411635 428 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 RPL39P40-201ENST00000445481 146 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 AC022447.4-201ENST00000504053 364 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 PTP4A1P4-201ENST00000512479 322 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 RN7SKP24-201ENST00000515888 284 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 Y_RNA.691-201ENST00000516611 103 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 Y_RNA.702-201ENST00000516843 96 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 RN7SKP57-201ENST00000517248 293 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 MIR5571-201ENST00000577998 113 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC138Q96M89 AC243960.4-201ENST00000600532 288 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 MIR3976-201ENST00000606807 139 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 MIR6128-201ENST00000615528 109 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms