Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 MTCO3P38-201ENST00000468910 766 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC00477Q96M19 AF213884.2-201ENST00000510417 903 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AC105417.1-201ENST00000514691 285 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 RNU6-314P-201ENST00000516574 104 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 SNORA43.2-201ENST00000516652 128 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 RNU2-44P-201ENST00000516795 194 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AL137161.1-201ENST00000532231 390 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 CBX3P7-201ENST00000532876 502 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC00477Q96M19 AC090115.3-201ENST00000553218 849 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 MTCO3P23-201ENST00000561363 289 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AC026464.5-201ENST00000562497 722 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AC087045.1-201ENST00000605856 382 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AC104458.1-201ENST00000608243 463 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LINC00477Q96M19 AC024581.2-201ENST00000619986 252 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 DUXAP9-208ENST00000622815 614 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AC022418.1-201ENST00000624118 445 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 Z69720.2-201ENST00000624755 279 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AC005609.4-201ENST00000625071 447 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
LINC00477Q96M19 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.57□□□□□ -2.16
LINC00477Q96M19 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU6-451P-201ENST00000362921 107 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU6-486P-201ENST00000363116 107 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU6-266P-201ENST00000364225 107 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU6-1032P-201ENST00000384100 107 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU6-517P-201ENST00000384362 110 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU6-1215P-201ENST00000384441 102 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LINC00477Q96M19 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU2-29P-201ENST00000410423 189 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 Y_RNA.615-201ENST00000410769 117 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU6-387P-201ENST00000411331 105 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AC008267.5-201ENST00000424928 265 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LINC00477Q96M19 AL121601.2-201ENST00000438019 707 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.56□□□□□ -2.16
LINC00477Q96M19 MTND1P1-201ENST00000445453 368 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.56□□□□□ -2.16
LINC00477Q96M19 MTND3P16-201ENST00000452205 344 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RPL23AP3-201ENST00000453844 468 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 PMCHL2-203ENST00000457791 237 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU6-717P-201ENST00000459076 104 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 MED28P2-201ENST00000475771 317 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LINC00477Q96M19 MTCYBP40-201ENST00000509390 1135 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AC074344.1-201ENST00000512823 224 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNA5SP137-201ENST00000516833 135 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNA5SP364-201ENST00000516938 78 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.56□□□□□ -2.16
LINC00477Q96M19 OR11H5P-201ENST00000554039 926 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AC010525.2-201ENST00000590920 195 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 VN1R80P-201ENST00000597126 338 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AC012557.2-201ENST00000605919 418 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AL121757.2-201ENST00000611223 313 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AC090517.2-201ENST00000614966 680 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AC009233.1-201ENST00000616477 371 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 uc_338.34-201ENST00000617467 174 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.56□□□□□ -2.16
LINC00477Q96M19 MIR6873-201ENST00000622788 63 ntBASIC1.56□□□□□ -2.16
LINC00477Q96M19 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.56□□□□□ -2.16
LINC00477Q96M19 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LINC00477Q96M19 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LINC00477Q96M19 RNU6-858P-201ENST00000362436 107 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 RNU6-1085P-201ENST00000363576 107 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 RNA5SP160-201ENST00000364866 120 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 MIR514A2-201ENST00000385131 88 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 MIR514A3-201ENST00000385132 88 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 RNA5SP219-201ENST00000390940 113 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LINC00477Q96M19 AL590002.1-201ENST00000406554 418 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 MTND1P4-201ENST00000435196 415 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 RPL23AP7-203ENST00000449021 469 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC00477Q96M19 AC003071.1-201ENST00000451219 789 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 SNRPFP3-201ENST00000457792 225 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 AC022364.2-201ENST00000457963 554 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 AC083904.1-201ENST00000487828 231 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
LINC00477Q96M19 AC011352.1-201ENST00000512300 793 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 RNU6-718P-201ENST00000516166 105 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC00477Q96M19 AP002770.2-201ENST00000543613 532 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.55□□□□□ -2.16
LINC00477Q96M19 HMGB1P33-201ENST00000563485 527 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.55□□□□□ -2.16
LINC00477Q96M19 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LINC00477Q96M19 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.55□□□□□ -2.16
LINC00477Q96M19 FAM157A-202ENST00000615155 405 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 YWHAEP7-203ENST00000622054 312 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 AC024614.3-201ENST00000637860 256 ntBASIC1.55□□□□□ -2.16
LINC00477Q96M19 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC00477Q96M19 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LINC00477Q96M19 SNORD56.1-201ENST00000362913 68 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 Y_RNA.256-201ENST00000364594 104 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 RNA5SP138-201ENST00000365098 114 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 RNU6-1042P-201ENST00000384204 107 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 RNU6-622P-201ENST00000384272 103 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms