Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC17Q96LX7 AC011890.2-201ENST00000613393 294 ntBASIC3.18□□□□□ -1.9
CCDC17Q96LX7 U2.21-201ENST00000637295 81 ntBASIC3.18□□□□□ -1.9
CCDC17Q96LX7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC17Q96LX7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC17Q96LX7 RPL9P7-201ENST00000330965 580 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 MIR449A-201ENST00000362113 91 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 Y_RNA.148-201ENST00000363557 117 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 RNU6-217P-201ENST00000384164 104 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 RNU6-293P-201ENST00000411259 106 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 AC113618.1-201ENST00000416747 285 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 AL512844.2-201ENST00000433990 593 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 AL035666.1-201ENST00000446195 348 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 AC008571.1-201ENST00000467232 300 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC17Q96LX7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC17Q96LX7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC17Q96LX7 RNU6-699P-201ENST00000517081 110 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 RN7SKP295-201ENST00000517264 153 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC17Q96LX7 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 MIR3976-201ENST00000606807 139 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 AC133104.2-201ENST00000615272 193 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.17□□□□□ -1.9
CCDC17Q96LX7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC17Q96LX7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC17Q96LX7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC17Q96LX7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC17Q96LX7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CCDC17Q96LX7 Y_RNA.48-201ENST00000362710 103 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 RNU6-827P-201ENST00000365553 106 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 Y_RNA.422-201ENST00000384054 114 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 MIR181A2-201ENST00000384863 110 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC17Q96LX7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC17Q96LX7 USMG5P1-201ENST00000425964 177 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AC098614.2-201ENST00000426040 255 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AL133396.1-201ENST00000432048 687 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AL078601.1-201ENST00000444542 271 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 HIGD1AP2-201ENST00000446367 280 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AL031274.1-201ENST00000450334 232 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AC022493.2-201ENST00000506122 481 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC17Q96LX7 RNU6-976P-201ENST00000516086 111 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 RNU1-61P-201ENST00000516107 151 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AL645944.1-201ENST00000603857 493 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AC007485.1-201ENST00000616755 206 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AC027309.3-201ENST00000623419 351 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 AC090617.7-201ENST00000623952 126 ntBASIC3.16□□□□□ -1.9
CCDC17Q96LX7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
CCDC17Q96LX7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC17Q96LX7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 RNU6-778P-201ENST00000363269 103 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 RNU6-270P-201ENST00000364131 105 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 RNU6-1317P-201ENST00000364582 104 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AL356057.3-201ENST00000402607 340 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 RNU6-174P-201ENST00000410406 106 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 BX276092.3-201ENST00000424182 230 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 RPL9P9-202ENST00000466501 579 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 RNA5SP282-201ENST00000516355 108 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 RNU6-988P-201ENST00000519081 107 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AC103996.1-201ENST00000555468 102 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AC008737.2-201ENST00000599446 118 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AP001836.1-201ENST00000604675 523 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 AC091925.1-201ENST00000623204 462 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 U6.99-201ENST00000637524 83 ntBASIC3.15□□□□□ -1.91
CCDC17Q96LX7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC17Q96LX7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 RNU6-428P-201ENST00000362942 107 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 Y_RNA.252-201ENST00000364556 101 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 RNY1P14-201ENST00000384426 108 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 RNU6-790P-201ENST00000384479 105 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 MCFD2P1-201ENST00000417812 300 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AL117339.3-201ENST00000418733 162 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms