Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USP47Q96K76 AC008555.8-201ENST00000623602 2168 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 RNU1-62P-201ENST00000362599 164 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 RNU6-384P-201ENST00000364900 104 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 RNU6-487P-201ENST00000365430 104 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 RNU6-1274P-201ENST00000384557 107 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
USP47Q96K76 RNU2-48P-201ENST00000410694 191 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AL031779.1-201ENST00000415663 330 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 MTCO3P5-201ENST00000433620 714 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 MTND5P2-201ENST00000442927 1142 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AP003392.2-201ENST00000527269 208 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AC016957.1-201ENST00000534895 309 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.72□□□□□ -2.13
USP47Q96K76 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.72□□□□□ -2.13
USP47Q96K76 AL109918.3-201ENST00000603072 338 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AC005034.5-201ENST00000604219 466 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AC004908.3-201ENST00000610248 625 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AC138749.5-201ENST00000611461 208 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AC116165.2-201ENST00000616705 206 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
USP47Q96K76 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.71□□□□□ -2.14
USP47Q96K76 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USP47Q96K76 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.71□□□□□ -2.14
USP47Q96K76 RNU6-371P-201ENST00000364283 108 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 RNU5E-5P-201ENST00000365379 116 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USP47Q96K76 RNU6-546P-201ENST00000383991 107 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 RNU6-641P-201ENST00000384006 107 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 MIR558-201ENST00000384920 94 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 RPS3AP36-201ENST00000398190 775 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 RNA5SP390-201ENST00000410191 113 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 RPL21P90-201ENST00000415692 466 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 AL593851.1-201ENST00000426171 157 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 AL356583.2-201ENST00000426536 280 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.71□□□□□ -2.14
USP47Q96K76 EPS15P1-201ENST00000448836 336 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 ZNF114P1-201ENST00000453500 292 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 SNORA43.2-201ENST00000516652 128 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.71□□□□□ -2.14
USP47Q96K76 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.71□□□□□ -2.14
USP47Q96K76 OR5AL2P-201ENST00000532185 920 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 AP000763.2-201ENST00000540641 163 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.71□□□□□ -2.14
USP47Q96K76 AL359314.1-201ENST00000616913 261 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 AC068787.1-201ENST00000623908 691 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 AL157786.1-207ENST00000627771 695 ntBASIC1.71□□□□□ -2.14
USP47Q96K76 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.7□□□□□ -2.14
USP47Q96K76 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.7□□□□□ -2.14
USP47Q96K76 SNORD56.1-201ENST00000362913 68 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 RNU2-23P-201ENST00000410545 195 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
USP47Q96K76 AL158823.1-201ENST00000418441 478 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 AC011233.1-201ENST00000422812 283 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.7□□□□□ -2.14
USP47Q96K76 RPS24P1-201ENST00000438550 371 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 USP9YP12-201ENST00000450481 570 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 HMGN2P18-201ENST00000450680 270 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.7□□□□□ -2.14
USP47Q96K76 RPL30P12-201ENST00000474666 353 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.7□□□□□ -2.14
USP47Q96K76 AC022878.1-201ENST00000530684 149 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.7□□□□□ -2.14
USP47Q96K76 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
USP47Q96K76 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
USP47Q96K76 AL137100.2-201ENST00000555786 315 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.7□□□□□ -2.14
USP47Q96K76 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 AC008521.1-201ENST00000587471 187 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 AC011458.1-201ENST00000604034 617 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 AC027449.1-201ENST00000608890 407 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 Z82243.1-201ENST00000609432 473 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 MIR6779-201ENST00000617283 64 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 MIR6515-201ENST00000619843 57 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 SCARNA4-202ENST00000625402 129 ntBASIC1.7□□□□□ -2.14
USP47Q96K76 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USP47Q96K76 OR4G2P-201ENST00000328113 903 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 RNU6-212P-201ENST00000362642 104 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 SNORD114-26-201ENST00000363543 72 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 SNORD114-27-201ENST00000363766 70 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 RNU6-1210P-201ENST00000363775 107 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 Y_RNA.354-201ENST00000365448 111 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 CBX3P9-201ENST00000402326 552 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USP47Q96K76 MED13P1-201ENST00000428342 171 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.69□□□□□ -2.14
USP47Q96K76 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.69□□□□□ -2.14
USP47Q96K76 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.69□□□□□ -2.14
USP47Q96K76 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.69□□□□□ -2.14
USP47Q96K76 AP005597.4-201ENST00000526762 229 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 AC073413.2-201ENST00000604332 360 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 MIR7844-201ENST00000616161 122 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 MIR6767-201ENST00000637302 66 ntBASIC1.69□□□□□ -2.14
USP47Q96K76 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
USP47Q96K76 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.68□□□□□ -2.14
USP47Q96K76 FARSBP1-201ENST00000435808 1778 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 RNU6-944P-201ENST00000364023 107 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 RNY1P12-201ENST00000364251 105 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms