Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VMP1Q96GC9 AL033519.2-201ENST00000403958 392 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 RNU2-9P-201ENST00000410194 145 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.14□□□□□ -2.07
VMP1Q96GC9 AL356320.1-201ENST00000429616 163 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 RNU6-991P-201ENST00000516168 107 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 AP005639.2-201ENST00000527592 928 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.14□□□□□ -2.07
VMP1Q96GC9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.14□□□□□ -2.07
VMP1Q96GC9 AC091544.4-201ENST00000555268 342 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.14□□□□□ -2.07
VMP1Q96GC9 MIR3136-201ENST00000583498 78 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 AC008752.3-201ENST00000588113 712 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 RSL24D1P11-201ENST00000591045 491 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.14□□□□□ -2.07
VMP1Q96GC9 AC107304.1-201ENST00000604229 296 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 AL034555.1-201ENST00000604816 211 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 AC123912.5-201ENST00000605470 343 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VMP1Q96GC9 MTND4P14-201ENST00000435799 1354 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 RNU6-428P-201ENST00000362942 107 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 RNU6-1141P-201ENST00000364520 107 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 RNU6-142P-201ENST00000384019 107 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 RNU6-43P-201ENST00000384302 107 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 RNU6-692P-201ENST00000384496 107 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 MIR597-201ENST00000384968 97 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 SNORA16.2-201ENST00000390991 127 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 RNA5SP425-201ENST00000410336 112 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 UBE2V1P4-201ENST00000425374 344 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 RPS15AP28-201ENST00000435088 386 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 RNA5SP57-201ENST00000459463 123 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 HMGB3P17-201ENST00000504195 649 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 AL391840.1-201ENST00000571144 367 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 MIR3941-201ENST00000582572 103 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 VN1R107P-201ENST00000601784 209 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 AC025449.1-201ENST00000603896 529 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 AC008536.2-201ENST00000607284 349 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 SNORD98-201ENST00000636377 67 ntBASIC2.13□□□□□ -2.07
VMP1Q96GC9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VMP1Q96GC9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VMP1Q96GC9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
VMP1Q96GC9 RNU4-15P-201ENST00000362613 141 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 RNU6-1120P-201ENST00000362988 108 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 RN7SKP142-201ENST00000411236 328 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VMP1Q96GC9 EIF4EP2-201ENST00000422816 654 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC010975.2-201ENST00000427781 588 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 MTCO2P11-201ENST00000431069 680 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC244670.1-201ENST00000436879 112 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC013470.1-201ENST00000453438 462 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 SNRPFP3-201ENST00000457792 225 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 RNU6-333P-201ENST00000459117 107 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC132942.1-201ENST00000486753 483 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC145146.1-201ENST00000496370 254 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC008549.1-201ENST00000512900 643 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AP005435.4-201ENST00000529514 284 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC002044.1-201ENST00000606707 158 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC013412.1-201ENST00000610687 192 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC073114.1-201ENST00000612027 490 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 MIR6766-201ENST00000622641 72 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VMP1Q96GC9 AC241585.2-209ENST00000638217 143 ntBASIC2.12□□□□□ -2.07
VMP1Q96GC9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
VMP1Q96GC9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VMP1Q96GC9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.11□□□□□ -2.07
VMP1Q96GC9 AP000560.1-201ENST00000624150 1937 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
VMP1Q96GC9 AL357139.1-201ENST00000407792 426 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 SNORA3.2-201ENST00000408221 125 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 RNA5SP489-201ENST00000410986 109 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 RN7SKP192-201ENST00000411291 327 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 AL358934.1-201ENST00000432346 324 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.11□□□□□ -2.07
VMP1Q96GC9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.11□□□□□ -2.07
VMP1Q96GC9 AL031667.1-201ENST00000440222 725 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 TRBV12-1-201ENST00000479785 344 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 BET1P1-201ENST00000482276 359 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.11□□□□□ -2.07
VMP1Q96GC9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms