Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 RNU6-187P-201ENST00000384139 106 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RNU6-378P-201ENST00000384324 107 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 SNORA53-201ENST00000391141 249 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RNU4-30P-201ENST00000410245 143 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RPL23AP95-201ENST00000426806 265 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 AC096638.1-201ENST00000444678 216 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RPL7P49-201ENST00000471402 708 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 AP002884.2-201ENST00000471647 395 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RPL26P26-201ENST00000480251 434 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RN7SL271P-201ENST00000487601 295 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 SEPT14P8-201ENST00000508026 178 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 AC027288.2-201ENST00000553028 243 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 MIR3133-201ENST00000583157 78 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 SNORD113-5-201ENST00000607261 78 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 AC024581.2-201ENST00000619986 252 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 SRP72P2-201ENST00000344851 1979 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RNU6-740P-201ENST00000364734 105 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RNU1-100P-201ENST00000365255 165 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RNU6-326P-201ENST00000365480 107 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 U8.10-201ENST00000384260 133 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RNU6-493P-201ENST00000391321 108 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 MIR1251-201ENST00000408552 70 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RPL26P27-201ENST00000414397 437 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 NDUFB4P10-201ENST00000452541 359 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RN7SL132P-201ENST00000478131 296 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 SNORA25.14-201ENST00000516481 132 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RNA5SP143-201ENST00000516936 115 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RNU2-31P-201ENST00000516954 155 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 RNU6-1212P-201ENST00000517023 104 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 MIR4423-201ENST00000580922 80 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 MIR3910-1-201ENST00000580936 111 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 AC010620.2-201ENST00000600135 313 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 AL606490.9-201ENST00000603331 271 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 MIR6868-201ENST00000611215 58 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 MIR6875-201ENST00000617506 72 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 MIR6500-201ENST00000622700 86 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 AL079305.1-201ENST00000623159 3008 ntBASIC3.36□□□□□ -1.87
NEIL1Q96FI4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEIL1Q96FI4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NEIL1Q96FI4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NEIL1Q96FI4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NEIL1Q96FI4 SNORD56.1-201ENST00000362913 68 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 RNU6-682P-201ENST00000363843 106 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 RNU1-140P-201ENST00000365040 165 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 RNY4P28-201ENST00000365281 93 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NEIL1Q96FI4 RNU6-541P-201ENST00000384709 110 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 MIR487A-201ENST00000385009 80 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 MIR10B-201ENST00000385011 110 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 Y_RNA.626-201ENST00000411288 95 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AC007969.2-201ENST00000441891 191 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 RN7SKP49-201ENST00000516675 260 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 IGKV2-38-201ENST00000517443 247 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AC087441.2-201ENST00000529141 262 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AK6P2-201ENST00000549020 471 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 UBL5P4-201ENST00000562584 236 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AC012468.1-201ENST00000604888 430 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AC005296.1-201ENST00000616145 209 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 MIR6134-201ENST00000617606 109 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.35□□□□□ -1.87
NEIL1Q96FI4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.35□□□□□ -1.87
NEIL1Q96FI4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NEIL1Q96FI4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NEIL1Q96FI4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.34□□□□□ -1.87
NEIL1Q96FI4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
NEIL1Q96FI4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
NEIL1Q96FI4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.34□□□□□ -1.87
NEIL1Q96FI4 RNU6-142P-201ENST00000384019 107 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms