Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC073073.2-201ENST00000609827 2578 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
CHFRQ96EP1 RNU6-173P-201ENST00000364215 104 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 RNU6-1317P-201ENST00000364582 104 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 Y_RNA.480-201ENST00000384364 102 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CHFRQ96EP1 RPS29P13-201ENST00000402041 169 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AL357075.1-201ENST00000404107 726 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AL162389.1-201ENST00000449233 177 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 RPL21P41-201ENST00000459863 264 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AP001486.1-201ENST00000463339 476 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.51□□□□□ -1.85
CHFRQ96EP1 AC087190.1-201ENST00000484462 480 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AC107032.1-201ENST00000485945 480 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 ACA59.1-201ENST00000515966 143 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 SNORA31.8-201ENST00000516327 108 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AC008489.1-201ENST00000524271 483 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 MRPS36P4-201ENST00000534436 298 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.51□□□□□ -1.85
CHFRQ96EP1 TRAV32-201ENST00000553993 340 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AC005951.2-201ENST00000576282 495 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 MIR5004-201ENST00000579078 107 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 CPDP1-201ENST00000579660 283 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 KLKP1-201ENST00000595979 403 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AC174048.1-201ENST00000603389 144 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AL137843.1-201ENST00000605078 385 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AC073657.2-201ENST00000605661 303 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AL590240.4-201ENST00000616908 390 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.51□□□□□ -1.85
CHFRQ96EP1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHFRQ96EP1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHFRQ96EP1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHFRQ96EP1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHFRQ96EP1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CHFRQ96EP1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.5□□□□□ -1.85
CHFRQ96EP1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.5□□□□□ -1.85
CHFRQ96EP1 Y_RNA.27-201ENST00000362540 103 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 RNA5SP197-201ENST00000363357 119 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 U8.8-201ENST00000365399 135 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 RNU6-804P-201ENST00000384286 107 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 RNU2-51P-201ENST00000410708 197 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 Y_RNA.626-201ENST00000411288 95 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 AC063979.1-201ENST00000415539 377 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 AC099677.1-201ENST00000420575 175 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 MTND3P25-201ENST00000509243 135 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 FCF1P8-201ENST00000510322 597 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.5□□□□□ -1.85
CHFRQ96EP1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
CHFRQ96EP1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.5□□□□□ -1.85
CHFRQ96EP1 MIR4276-201ENST00000584832 70 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 BDH2P1-201ENST00000602288 736 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 AL121917.1-203ENST00000605534 577 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 U2.14-201ENST00000615943 113 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.5□□□□□ -1.85
CHFRQ96EP1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHFRQ96EP1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.5□□□□□ -1.85
CHFRQ96EP1 AC006504.1-201ENST00000562493 3666 ntBASIC3.5□□□□□ -1.85
CHFRQ96EP1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHFRQ96EP1 RNU6-858P-201ENST00000362436 107 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 RNU6-595P-201ENST00000363944 107 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 RNU6-1117P-201ENST00000384525 104 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 Y_RNA.581-201ENST00000391017 97 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 AL591034.2-201ENST00000402839 359 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.49□□□□□ -1.85
CHFRQ96EP1 RPL21P90-201ENST00000415692 466 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.49□□□□□ -1.85
CHFRQ96EP1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 AL360271.2-201ENST00000447710 161 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 AL513124.1-201ENST00000450410 614 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 AC109925.1-201ENST00000478069 331 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 RPL31P60-201ENST00000478450 367 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.49□□□□□ -1.85
CHFRQ96EP1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.49□□□□□ -1.85
CHFRQ96EP1 RN7SKP60-201ENST00000516985 239 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.49□□□□□ -1.85
CHFRQ96EP1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.49□□□□□ -1.85
CHFRQ96EP1 MIR4325-201ENST00000583049 90 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 AP001485.1-201ENST00000604799 199 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 AL031601.2-202ENST00000622650 282 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHFRQ96EP1 MFSD8-233ENST00000641482 4860 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHFRQ96EP1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.49□□□□□ -1.85
CHFRQ96EP1 LINC02555-201ENST00000563933 1951 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 HAUS6P2-201ENST00000433254 2404 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 CUL1P1-201ENST00000509510 2425 ntBASIC3.49□□□□□ -1.85
CHFRQ96EP1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
CHFRQ96EP1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHFRQ96EP1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CHFRQ96EP1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CHFRQ96EP1 Y_RNA.143-201ENST00000363520 106 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 RNY4P28-201ENST00000365281 93 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 RNU6-102P-201ENST00000384485 104 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 AL513475.1-201ENST00000406602 315 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 CYCSP33-201ENST00000414485 327 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms