Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MRPL35P1-201ENST00000404272 572 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 Y_RNA.592-201ENST00000410274 109 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC096920.1-201ENST00000423991 241 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 SETP5-201ENST00000437270 562 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AL162389.1-201ENST00000449233 177 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 RPS29P26-201ENST00000477483 171 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC067942.3-201ENST00000512025 362 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 RNU6-346P-201ENST00000516288 111 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 RNU1-103P-201ENST00000516502 125 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 CPDP1-201ENST00000579660 283 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC004832.4-201ENST00000608952 331 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC099506.2-201ENST00000623074 221 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 AC058791.1-201ENST00000608412 3198 ntBASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3RF3Q8TEJ3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 AL136164.4-201ENST00000625013 2135 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 RNU1-76P-201ENST00000362903 159 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 Y_RNA.81-201ENST00000362997 102 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 MIR613-201ENST00000385248 95 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 SNORD67-201ENST00000390833 111 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 COX6CP10-201ENST00000416832 224 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 RPL21P41-201ENST00000459863 264 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 HMGN2P13-201ENST00000476476 274 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 SNORA25.14-201ENST00000516481 132 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 AP002392.1-201ENST00000537692 208 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 MIR4273-201ENST00000582824 84 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 AC006386.2-201ENST00000624491 75 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 AC012005.1-201ENST00000624575 75 ntBASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
SH3RF3Q8TEJ3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 Y_RNA.76-201ENST00000362931 109 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 SNORD81.1-201ENST00000363064 77 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 RNU6-1081P-201ENST00000384537 107 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 RNU6-325P-201ENST00000411132 105 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 MTND3P9-201ENST00000429526 346 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 AL445305.1-201ENST00000432577 575 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 AL360271.2-201ENST00000447710 161 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 RPL31P60-201ENST00000478450 367 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 AC010469.2-201ENST00000496412 480 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 AL359273.1-201ENST00000510918 627 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 RNU6-861P-201ENST00000516745 106 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 RN7SKP60-201ENST00000516985 239 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 SNRPGP16-201ENST00000533275 226 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 MIR4300-201ENST00000581016 96 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 AL033523.1-201ENST00000605153 153 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 RMST_8.1-201ENST00000610287 165 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 AP001486.2-201ENST00000561652 5113 ntBASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF3Q8TEJ3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 Y_RNA.199-201ENST00000364014 102 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 U8.8-201ENST00000365399 135 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 SNORD50.2-201ENST00000365465 70 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 RNU6-790P-201ENST00000384479 105 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 Y_RNA.541-201ENST00000384640 113 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 SNORD15B-201ENST00000384714 146 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 MIR634-201ENST00000385208 97 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 SNORA69.1-201ENST00000390904 137 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 CYCSP33-201ENST00000414485 327 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 HMGB3P8-201ENST00000449709 577 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 MTND3P25-201ENST00000509243 135 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 SNORA31.8-201ENST00000516327 108 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms