Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 RPL9P7-201ENST00000330965 580 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 RNU6-797P-201ENST00000363101 109 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 MIR627-201ENST00000384979 97 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 RNU6-750P-201ENST00000390946 107 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 RPS29P13-201ENST00000402041 169 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 RNA5SP508-201ENST00000411327 119 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AL139396.1-201ENST00000421137 167 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AL590632.1-201ENST00000424289 371 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AC130509.1-201ENST00000464158 433 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 MIR4790-201ENST00000577799 79 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 POLR3GP2-201ENST00000588366 668 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS52Q8N1B4 AC112487.2-201ENST00000637950 304 ntBASIC2.97□□□□□ -1.93
VPS52Q8N1B4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS52Q8N1B4 RNU6-1280P-201ENST00000365211 107 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 MIR512-1-201ENST00000384913 84 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 FTH1P15-201ENST00000406984 280 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 MIR548F5-201ENST00000408421 86 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 RNU2-49P-201ENST00000410666 184 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 RNA5SP21-201ENST00000410917 96 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AC074085.1-201ENST00000413598 418 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AL161651.1-201ENST00000440882 223 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 MRPL42P6-201ENST00000486397 371 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 RNU6-581P-201ENST00000516214 105 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AC104576.1-201ENST00000524225 88 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS52Q8N1B4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS52Q8N1B4 VN1R107P-201ENST00000601784 209 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AC091152.3-201ENST00000604227 325 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AC005046.1-201ENST00000608515 625 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AC090115.4-201ENST00000609970 188 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
VPS52Q8N1B4 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS52Q8N1B4 AC243829.7-201ENST00000633081 225 ntBASIC2.96□□□□□ -1.94
VPS52Q8N1B4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS52Q8N1B4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 AC010889.1-201ENST00000566193 2666 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 RNU1-105P-201ENST00000363470 161 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 Y_RNA.356-201ENST00000365475 113 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 RNU6-827P-201ENST00000365553 106 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 AL590004.2-201ENST00000404787 371 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 RPS3AP52-201ENST00000435639 297 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 FABP5P14-201ENST00000437273 393 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 AC107399.1-201ENST00000451226 265 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 RAC1P5-201ENST00000512182 576 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 ACA59.2-201ENST00000517061 156 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 RN7SKP40-201ENST00000517211 242 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 IMMP1LP2-201ENST00000552954 492 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 TRAV32-201ENST00000553993 340 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 AL391813.1-201ENST00000603098 260 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 AL121917.1-203ENST00000605534 577 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 AC011890.2-201ENST00000613393 294 ntBASIC2.95□□□□□ -1.94
VPS52Q8N1B4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VPS52Q8N1B4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS52Q8N1B4 Y_RNA.61-201ENST00000362835 102 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 RNU4-73P-201ENST00000363164 141 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 RNU6-105P-201ENST00000363909 104 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 Y_RNA.509-201ENST00000384506 99 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 MIR181A2-201ENST00000384863 110 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS52Q8N1B4 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AL031274.1-201ENST00000450334 232 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 RNU6-1037P-201ENST00000459571 107 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS52Q8N1B4 RPS27P26-201ENST00000494583 239 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 RPS27P27-201ENST00000498779 255 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AC008549.1-201ENST00000512900 643 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 RNU6-377P-201ENST00000515965 102 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.94□□□□□ -1.94
VPS52Q8N1B4 HPRT1P3-201ENST00000539521 576 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AC091544.4-201ENST00000555268 342 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AC009163.5-201ENST00000575421 637 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 CPDP1-201ENST00000579660 283 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AC009314.1-201ENST00000603871 304 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AC113139.1-201ENST00000605049 239 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AL359198.2-201ENST00000611836 194 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AC092608.2-201ENST00000624427 218 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms