Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 MIR3913-1-201ENST00000577744 102 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 AL031274.2-201ENST00000599419 203 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 Z82243.1-201ENST00000609432 473 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 AL359314.1-201ENST00000616913 261 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 RNU6-1029P-201ENST00000384109 107 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 MIR504-201ENST00000385065 83 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 RNA5SP450-201ENST00000411206 102 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AL596276.1-201ENST00000434465 418 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC244505.5-201ENST00000443639 207 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 MTND1P18-201ENST00000448191 573 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 MTCO2P6-201ENST00000463134 685 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 RPL30P12-201ENST00000474666 353 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC074344.1-201ENST00000512823 224 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 RNU6-667P-201ENST00000517186 102 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC078795.2-201ENST00000602835 1252 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AL078605.1-201ENST00000603529 500 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC245014.2-201ENST00000603689 287 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 SEPT7P9-203ENST00000604116 343 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC246785.4-201ENST00000605374 287 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC099842.1-201ENST00000619919 596 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 AC136475.10-201ENST00000620253 385 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 U4.7-201ENST00000638126 106 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 MTND4P23-201ENST00000447723 1363 ntBASIC1.8□□□□□ -2.12
CCDC65Q8IXS2 RNU6-1287P-201ENST00000362914 107 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 RNU6-181P-201ENST00000363225 107 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 RNU6-1060P-201ENST00000384664 107 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 MIR518A2-201ENST00000384966 87 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 C1DP2-201ENST00000418167 426 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 CYCSP49-201ENST00000420810 319 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AL365400.1-201ENST00000431854 640 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 RNU7-182P-201ENST00000459009 62 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AC096745.1-201ENST00000509945 370 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 RNU6-970P-201ENST00000516312 107 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 RNU6-445P-201ENST00000516949 107 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AP003392.2-201ENST00000527269 208 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AC027807.1-201ENST00000559921 996 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 MIR3683-201ENST00000580847 82 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AC025811.1-201ENST00000604312 472 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AC006566.1-201ENST00000608943 513 ntBASIC1.79□□□□□ -2.12
CCDC65Q8IXS2 AC006026.1-201ENST00000444025 1803 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 U3.13-201ENST00000364804 214 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 Y_RNA.324-201ENST00000365165 102 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 MIR1262-201ENST00000408276 93 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 PIGFP2-201ENST00000421400 651 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 USP9YP18-201ENST00000425912 695 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 AC012308.1-201ENST00000451232 178 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 RPS29P15-201ENST00000458329 171 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 RPL30P1-201ENST00000488676 339 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 HMGB1P35-201ENST00000503360 598 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 RNU6-1178P-201ENST00000516674 107 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 RN7SKP256-201ENST00000517201 314 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 AL136363.2-201ENST00000604173 851 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 Z84480.1-201ENST00000605131 311 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 AC068944.2-201ENST00000610373 403 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 U6.114-201ENST00000636407 96 ntBASIC1.78□□□□□ -2.12
CCDC65Q8IXS2 WWP1P1-201ENST00000466609 2769 ntBASIC1.77□□□□□ -2.13
CCDC65Q8IXS2 RNU6-212P-201ENST00000362642 104 ntBASIC1.77□□□□□ -2.13
CCDC65Q8IXS2 RNU4-48P-201ENST00000365559 182 ntBASIC1.77□□□□□ -2.13
CCDC65Q8IXS2 RNU6-348P-201ENST00000384386 107 ntBASIC1.77□□□□□ -2.13
CCDC65Q8IXS2 MIR1283-2-201ENST00000408621 87 ntBASIC1.77□□□□□ -2.13
CCDC65Q8IXS2 RNU2-32P-201ENST00000411193 191 ntBASIC1.77□□□□□ -2.13
CCDC65Q8IXS2 AC133104.1-201ENST00000429100 218 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms