Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MIR1294-201ENST00000408503 142 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RPS15AP10-201ENST00000432472 382 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 PRELID3BP1-201ENST00000457142 540 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AL590229.1-201ENST00000603497 542 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-6P-201ENST00000606623 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AC091834.1-201ENST00000614543 472 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AC063943.3-201ENST00000615562 356 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 AP006437.1-201ENST00000641440 3685 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 RNU4-42P-201ENST00000364738 142 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 RNU4-48P-201ENST00000365559 182 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-456P-201ENST00000384493 107 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 MIR1283-2-201ENST00000408621 87 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 RPS20P15-201ENST00000412792 311 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC133104.1-201ENST00000429100 218 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC244505.5-201ENST00000443639 207 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 FDX1P2-201ENST00000450769 375 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 RPS29P21-201ENST00000496272 170 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC092436.1-201ENST00000506450 503 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC117532.1-201ENST00000514638 323 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AP000889.1-201ENST00000530968 660 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC018630.3-201ENST00000542637 96 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 MIR3913-1-201ENST00000577744 102 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC008945.2-201ENST00000606056 604 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC063944.3-201ENST00000609969 533 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC087241.4-201ENST00000612441 480 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 AC120349.3-201ENST00000624377 529 ntBASIC1.69□□□□□ -2.14
NUDCD3Q8IVD9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-181P-201ENST00000363225 107 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-105P-201ENST00000363909 104 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-743P-201ENST00000364151 106 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 MIR9-3-201ENST00000385084 90 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 Y_RNA.597-201ENST00000410463 100 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 RNU4-46P-201ENST00000410818 138 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 BX510359.4-201ENST00000423750 193 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 AL031667.1-201ENST00000440222 725 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 KATNBL1P3-201ENST00000443475 909 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 MTND2P33-201ENST00000506452 1031 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-445P-201ENST00000516949 107 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 CBX3P4-201ENST00000538909 354 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 MIR4703-201ENST00000577728 79 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 AC010928.2-201ENST00000588017 287 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 AC013412.1-201ENST00000610687 192 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 AC104073.3-201ENST00000610942 955 ntBASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NUDCD3Q8IVD9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 SNORD14D-201ENST00000384390 87 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-1222P-201ENST00000384615 107 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 MIR29C-201ENST00000385231 88 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 PIGFP2-201ENST00000421400 651 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 RPS6P15-201ENST00000431996 751 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 IFNA20P-201ENST00000436840 528 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 MTCO2P6-201ENST00000463134 685 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 MTCO3P7-201ENST00000510008 774 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 PTP4A1P4-201ENST00000512479 322 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 AC110588.1-201ENST00000559699 137 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 AC123912.5-201ENST00000605470 343 ntBASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NUDCD3Q8IVD9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 AC092881.1-201ENST00000638218 2733 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 BTF3L4P2-201ENST00000392798 346 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 HMGN2P3-201ENST00000433603 273 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 HMGN2P5-201ENST00000436882 273 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms