Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MIR8074-201ENST00000615081 81 ntBASIC0.96□□□□□ -2.26
LRRC28Q86X40 AC092140.2-201ENST00000618027 521 ntBASIC0.96□□□□□ -2.26
LRRC28Q86X40 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.96□□□□□ -2.26
LRRC28Q86X40 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.96□□□□□ -2.26
LRRC28Q86X40 AC103706.2-201ENST00000638080 240 ntBASIC0.96□□□□□ -2.26
LRRC28Q86X40 AC006927.4-201ENST00000639187 543 ntBASIC0.96□□□□□ -2.26
LRRC28Q86X40 AC233981.2-201ENST00000611524 1614 ntBASIC0.96□□□□□ -2.26
LRRC28Q86X40 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
LRRC28Q86X40 OR4G2P-201ENST00000328113 903 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
LRRC28Q86X40 RNU6-371P-201ENST00000364283 108 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 MTND4P20-201ENST00000424125 869 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC244505.5-201ENST00000443639 207 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 MTND2P4-201ENST00000445034 1004 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AL606662.1-201ENST00000445763 553 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AL035666.1-201ENST00000446195 348 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 snoU13.9-201ENST00000458927 103 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC010409.1-201ENST00000487382 476 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC112206.4-201ENST00000515142 405 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 RNU7-40P-201ENST00000516397 64 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 RNU6-965P-201ENST00000516721 96 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 RNA5SP337-201ENST00000517007 109 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC012065.4-201ENST00000602445 679 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC018714.1-201ENST00000605028 208 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC012409.4-201ENST00000612923 249 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AL359547.2-201ENST00000615810 418 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC131159.1-201ENST00000621854 213 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 AC090517.3-201ENST00000625170 141 ntBASIC0.95□□□□□ -2.26
LRRC28Q86X40 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.95□□□□□ -2.26
LRRC28Q86X40 RNU1-22P-201ENST00000363334 158 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 SNORD113-6-201ENST00000363345 75 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 RNU6-660P-201ENST00000364566 109 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
LRRC28Q86X40 RNU6-439P-201ENST00000384188 106 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 RNU6-39P-201ENST00000384344 107 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 BTF3L4P1-201ENST00000413813 468 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 AC114491.1-201ENST00000416095 246 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 SNRPEP10-201ENST00000420249 274 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.94□□□□□ -2.26
LRRC28Q86X40 ISCA1P6-201ENST00000427740 390 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 CALM2P2-201ENST00000428512 440 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 CBX3P6-201ENST00000430257 527 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.94□□□□□ -2.26
LRRC28Q86X40 AL009048.1-201ENST00000450437 298 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.94□□□□□ -2.26
LRRC28Q86X40 AP005660.1-201ENST00000522972 293 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.94□□□□□ -2.26
LRRC28Q86X40 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
LRRC28Q86X40 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.94□□□□□ -2.26
LRRC28Q86X40 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.94□□□□□ -2.26
LRRC28Q86X40 MIR4509-3-201ENST00000578671 94 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.94□□□□□ -2.26
LRRC28Q86X40 MIR4509-2-201ENST00000583920 94 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 MIR548AC-201ENST00000585049 88 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 DEFB131E-202ENST00000602581 683 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 AC022022.2-201ENST00000602989 360 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 AL136363.2-201ENST00000604173 851 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.94□□□□□ -2.26
LRRC28Q86X40 MIR8070-201ENST00000616510 88 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 RMST_4.1-201ENST00000616886 107 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 MIR4509-1-201ENST00000618224 94 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 AP000720.1-201ENST00000625091 483 ntBASIC0.94□□□□□ -2.26
LRRC28Q86X40 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
LRRC28Q86X40 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LRRC28Q86X40 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 MTND5P9-201ENST00000503854 1755 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 MIR340-201ENST00000362125 95 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 snoU2_19.1-201ENST00000362361 80 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 RNA5SP493-201ENST00000364115 91 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 SNORD114-6-201ENST00000364393 72 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 RPS3AP36-201ENST00000398190 775 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 RPS27AP14-201ENST00000422868 454 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 AL365400.1-201ENST00000431854 640 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 RPL37P21-201ENST00000435890 276 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AL135790.2-201ENST00000437701 267 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 MTND5P2-201ENST00000442927 1142 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AC091951.3-201ENST00000504093 246 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 RNU7-51P-201ENST00000516560 62 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 AC011979.2-201ENST00000527568 352 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms