Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 BNIP3P16-201ENST00000589779 534 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 AL049779.4-201ENST00000604500 156 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 AC087241.4-201ENST00000612441 480 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 AC068792.1-201ENST00000621354 417 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PRPF39Q86UA1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.47□□□□□ -2.01
PRPF39Q86UA1 Z82209.1-201ENST00000422141 2135 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PRPF39Q86UA1 RNA5SP289-201ENST00000362332 137 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 U8.2-201ENST00000363156 134 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 MIR1261-201ENST00000408659 82 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AC243964.1-201ENST00000441814 261 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PRPF39Q86UA1 ANXA2P1-201ENST00000505539 926 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 CCDC34P1-201ENST00000507441 517 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AC008549.1-201ENST00000512900 643 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 RNU6-189P-201ENST00000516120 101 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 SNORA31.11-201ENST00000516528 139 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AL512360.1-201ENST00000555346 234 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AC103996.1-201ENST00000555468 102 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.46□□□□□ -2.02
PRPF39Q86UA1 VN1R80P-201ENST00000597126 338 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AC025165.5-201ENST00000602802 578 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 AL359880.1-201ENST00000621879 266 ntBASIC2.46□□□□□ -2.02
PRPF39Q86UA1 RNU4-75P-201ENST00000364621 146 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 SNORA41-201ENST00000384675 132 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 MTCO3P41-201ENST00000414801 328 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AL135786.1-201ENST00000415892 214 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 TIMM9P3-201ENST00000428659 274 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 DLGAP5P1-201ENST00000430307 464 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 MTCO2P7-201ENST00000446518 666 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AL513124.1-201ENST00000450410 614 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AC090115.3-201ENST00000553218 849 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AC092747.3-201ENST00000603769 301 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 ELOCP5-201ENST00000604924 333 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AC004492.1-201ENST00000607036 742 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AL159153.1-201ENST00000619688 317 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AC241585.2-209ENST00000638217 143 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AC016717.2-201ENST00000609089 5141 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 ZNF658B-202ENST00000615961 3375 ntBASIC2.45□□□□□ -2.02
PRPF39Q86UA1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PRPF39Q86UA1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PRPF39Q86UA1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PRPF39Q86UA1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.44□□□□□ -2.02
PRPF39Q86UA1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.44□□□□□ -2.02
PRPF39Q86UA1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRPF39Q86UA1 RNU6-692P-201ENST00000384496 107 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 CALM2P3-201ENST00000400429 449 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 RNA5SP425-201ENST00000410336 112 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 RNU2-32P-201ENST00000411193 191 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 EDDM3CP-201ENST00000415977 425 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 Z98742.3-201ENST00000418637 326 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AL117339.3-201ENST00000418733 162 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AC234781.5-201ENST00000508429 271 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AC009646.1-201ENST00000510455 318 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.44□□□□□ -2.02
PRPF39Q86UA1 CENPUP1-201ENST00000526649 1202 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AC021269.2-201ENST00000532318 330 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AP000763.2-201ENST00000540641 163 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AC078814.3-201ENST00000553036 491 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AC009127.3-201ENST00000570531 403 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 RPS3AP23-202ENST00000574601 686 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AC103987.3-201ENST00000582071 292 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 MIR4424-201ENST00000585257 86 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 AC067747.1-201ENST00000608026 250 ntBASIC2.44□□□□□ -2.02
PRPF39Q86UA1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRPF39Q86UA1 RNU6-546P-201ENST00000383991 107 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 SNORA3.2-201ENST00000408221 125 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 RN7SKP192-201ENST00000411291 327 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 POLHP1-201ENST00000411806 470 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 HMGB3P2-201ENST00000411913 584 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 DNAJC19P4-201ENST00000440115 345 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AL353752.1-201ENST00000454946 260 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 RNU7-138P-201ENST00000459479 64 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC087884.1-201ENST00000469738 328 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.43□□□□□ -2.02
PRPF39Q86UA1 RPL21P99-201ENST00000480369 423 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.43□□□□□ -2.02
PRPF39Q86UA1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms