Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC022493.2-201ENST00000506122 481 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 SNORA25.10-201ENST00000515926 124 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-1137P-201ENST00000517073 99 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 AC023442.1-201ENST00000531247 422 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 HMGB1P14-201ENST00000557424 591 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 SUB1P3-201ENST00000564581 315 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 AL355598.1-201ENST00000604169 202 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 AC006111.3-201ENST00000622137 383 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 U8.8-201ENST00000365399 135 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-827P-201ENST00000365553 106 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-790P-201ENST00000384479 105 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 AL031274.1-201ENST00000450334 232 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 RPL12P25-201ENST00000455592 494 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 MTND5P22-201ENST00000458380 195 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 ACA59.1-201ENST00000515966 143 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 MIR4680-201ENST00000580906 66 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 MIR3162-201ENST00000581818 82 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 AC009314.1-201ENST00000603871 304 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 AC018889.1-201ENST00000605372 397 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 AC008962.1-201ENST00000605729 304 ntBASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.48□□□□□ -1.85
UBE3BQ7Z3V4 MTND4P1-201ENST00000457501 1466 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 RPL9P7-201ENST00000330965 580 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 Z98749.2-208ENST00000381646 500 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-72P-201ENST00000384285 79 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-933P-201ENST00000384424 107 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 MRPL42P3-201ENST00000401492 326 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AL591034.2-201ENST00000402839 359 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AL513475.1-201ENST00000406602 315 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 SNORA11.2-201ENST00000408318 127 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 RPL26P27-201ENST00000414397 437 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC113618.1-201ENST00000416747 285 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC063976.3-201ENST00000426849 329 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 MTND3P2-201ENST00000438452 342 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AL513043.1-201ENST00000439124 535 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 HIGD1AP2-201ENST00000446367 280 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 RPL9P9-202ENST00000466501 579 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC003982.1-202ENST00000469928 248 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC068781.1-201ENST00000488231 618 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-120P-201ENST00000516077 103 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 Y_RNA.720-201ENST00000517166 92 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AMZ2P1-203ENST00000565833 850 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 MIR4782-201ENST00000577987 79 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 BNIP3P16-201ENST00000589779 534 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC005046.1-201ENST00000608515 625 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC007485.1-201ENST00000616755 206 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC008121.3-201ENST00000618726 433 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 SCARNA4-202ENST00000625402 129 ntBASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
UBE3BQ7Z3V4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.46□□□□□ -1.85
UBE3BQ7Z3V4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 Y_RNA.80-201ENST00000362996 102 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-1317P-201ENST00000364582 104 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 Y_RNA.428-201ENST00000384078 102 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 MIR888-201ENST00000401186 77 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-985P-201ENST00000410182 104 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 RNA5SP21-201ENST00000410917 96 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 BX276092.3-201ENST00000424182 230 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 AL358176.2-201ENST00000425769 204 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 AC244505.4-201ENST00000434905 287 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms