Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC012308.1-201ENST00000451232 178 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 AP001324.2-201ENST00000461163 319 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC117440.1-201ENST00000474107 571 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 FO393415.2-201ENST00000480085 343 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC006445.1-201ENST00000491925 405 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC114801.2-201ENST00000503825 781 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 MRPS36P2-201ENST00000512569 299 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC093303.1-201ENST00000514549 295 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 SNORA31.6-201ENST00000516241 130 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 SCARNA16.2-201ENST00000516520 172 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 RNU6-1153P-201ENST00000516760 105 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 Y_RNA.701-201ENST00000516812 110 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 RNU6-56P-201ENST00000516986 93 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 AL356055.1-201ENST00000602528 446 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC008739.3-201ENST00000603262 127 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 AL137843.1-201ENST00000605078 385 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC006133.1-201ENST00000617106 264 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHFQ7M4L6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHFQ7M4L6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 Y_RNA.187-201ENST00000363918 113 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 SNORA71.1-201ENST00000364523 117 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 SNORD32A-201ENST00000364805 84 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 Y_RNA.315-201ENST00000365117 102 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 RNU6-890P-201ENST00000384121 107 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 SNORA54-201ENST00000384281 123 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 RN7SKP220-201ENST00000410611 288 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 RNU6-1245P-201ENST00000411130 106 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 BX276092.3-201ENST00000424182 230 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 OSTCP8-201ENST00000445117 448 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC007677.1-201ENST00000445757 515 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 RPL27AP5-201ENST00000469428 449 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 RN7SL807P-201ENST00000470923 297 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC027575.1-201ENST00000481064 460 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC091874.1-201ENST00000511402 339 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 SNORA67.7-201ENST00000516664 135 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC093249.1-201ENST00000567049 203 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC011471.1-201ENST00000585766 187 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC008739.2-201ENST00000597006 317 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC080078.3-201ENST00000605407 463 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC092608.2-201ENST00000624427 218 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 AC009487.2-201ENST00000420969 6821 ntBASIC2.61□□□□□ -1.99
SHFQ7M4L6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHFQ7M4L6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.61□□□□□ -1.99
SHFQ7M4L6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 AC103988.1-201ENST00000566382 2177 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 SNORD50.1-201ENST00000362987 71 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RNA5SP72-201ENST00000364442 117 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RNA5SP267-201ENST00000364893 126 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 SNORA9.2-201ENST00000365361 133 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 SNORA75.6-201ENST00000391318 127 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RPL21P75-201ENST00000396599 483 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RPL21P28-201ENST00000401418 483 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 AL591034.2-201ENST00000402839 359 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RNA5SP390-201ENST00000410191 113 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RNA5SP120-201ENST00000410900 112 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 AL354751.2-201ENST00000415471 210 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 NUP35P1-201ENST00000422734 947 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 RPL21P39-201ENST00000463605 483 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RPL30P12-201ENST00000474666 353 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 AC087190.1-201ENST00000484462 480 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 AC093591.1-201ENST00000491435 481 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RPL21P129-201ENST00000491732 478 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RPL21P16-201ENST00000495531 483 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 MIR5004-201ENST00000579078 107 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms