Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MIR6868-201ENST00000611215 58 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC006001.4-201ENST00000622243 395 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC021753.1-201ENST00000635724 168 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AC073073.2-201ENST00000609827 2578 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 MAPK10-372ENST00000641954 3413 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 MIR410-201ENST00000362222 80 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 U3.19-201ENST00000390893 196 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AC138623.1-201ENST00000418060 216 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AL162151.2-201ENST00000448875 158 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 RN7SKP83-201ENST00000516512 178 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 RNU6-928P-201ENST00000516876 104 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 MIR4738-201ENST00000579134 87 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 MIR4644-201ENST00000579929 84 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AC072026.1-201ENST00000605023 201 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AC011921.3-201ENST00000605540 361 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AL359198.2-201ENST00000611836 194 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 AL357075.2-201ENST00000614906 189 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 USP8P1-201ENST00000494673 3183 ntBASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF111Q6ZNA4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 RNA5SP189-201ENST00000364920 115 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 Y_RNA.331-201ENST00000365267 102 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 RNU6-1289P-201ENST00000384431 106 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 YPEL5P1-201ENST00000419731 367 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 MTCO1P5-201ENST00000433573 344 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 POLR2KP2-201ENST00000438155 177 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 AC083863.1-201ENST00000438811 231 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 AC010095.1-201ENST00000443543 144 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 Y_RNA.638-201ENST00000459374 113 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 TRBV12-2-201ENST00000489763 344 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 RNA5SP468-201ENST00000516782 93 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 RMST_8.1-201ENST00000610287 165 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 AC004825.2-201ENST00000616634 455 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF111Q6ZNA4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 RNU6-137P-201ENST00000363680 108 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 RNU6-873P-201ENST00000363833 107 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 RNU6-923P-201ENST00000364753 107 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AL358075.3-201ENST00000426289 226 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AL606753.1-201ENST00000427435 87 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AC092017.2-201ENST00000427600 362 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AL117339.2-201ENST00000430475 180 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 HMGB1P37-201ENST00000439613 609 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AC012308.1-201ENST00000451232 178 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AP000705.1-201ENST00000454567 350 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 RPL26P9-201ENST00000457466 433 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AC009163.5-201ENST00000575421 637 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 MIR4282-201ENST00000583613 67 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AC005176.2-201ENST00000596933 147 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AL590240.4-201ENST00000616908 390 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AL591424.2-201ENST00000617023 128 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AC068724.3-201ENST00000625906 87 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AC132825.6-201ENST00000638861 357 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 FAM35BP-202ENST00000497389 3337 ntBASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF111Q6ZNA4 AC022336.2-201ENST00000568966 2538 ntBASIC3.71□□□□□ -1.82
RNF111Q6ZNA4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RNF111Q6ZNA4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.71□□□□□ -1.82
RNF111Q6ZNA4 MIR372-201ENST00000362225 67 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms