Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PPP4R3CPQ6ZMV5 DNM1P47-203ENST00000571780 12667 ntBASIC6.56□□□□□ -1.36
PPP4R3CPQ6ZMV5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.56□□□□□ -1.36
PPP4R3CPQ6ZMV5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.56□□□□□ -1.36
PPP4R3CPQ6ZMV5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.56□□□□□ -1.36
PPP4R3CPQ6ZMV5 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PPP4R3CPQ6ZMV5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
PPP4R3CPQ6ZMV5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PPP4R3CPQ6ZMV5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 MIR519C-201ENST00000385053 87 ntBASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 AP000567.1-201ENST00000406413 156 ntBASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 RPS12P2-201ENST00000439728 269 ntBASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 AL109933.2-201ENST00000452651 260 ntBASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 ACA64.1-201ENST00000459171 127 ntBASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPP4R3CPQ6ZMV5 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 Y_RNA.171-201ENST00000363760 102 ntBASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 SNORD115-27-201ENST00000364430 82 ntBASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 SNORA80E-201ENST00000384744 137 ntBASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 RN7SKP27-201ENST00000410684 333 ntBASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 AC073073.1-201ENST00000493920 463 ntBASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 AL133243.3-201ENST00000617415 3004 ntBASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPP4R3CPQ6ZMV5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 AC092881.1-201ENST00000638218 2733 ntBASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 RNA5SP46-201ENST00000362370 120 ntBASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 RNU6-315P-201ENST00000362666 107 ntBASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 SNORD115-37-201ENST00000363768 82 ntBASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 Y_RNA.241-201ENST00000364470 117 ntBASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 AC069257.2-201ENST00000441819 155 ntBASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 SNORA31.4-201ENST00000516049 129 ntBASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 AC006130.2-201ENST00000586202 326 ntBASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PPP4R3CPQ6ZMV5 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.52□□□□□ -1.36
PPP4R3CPQ6ZMV5 AC007159.1-201ENST00000566529 4706 ntBASIC6.52□□□□□ -1.36
PPP4R3CPQ6ZMV5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
PPP4R3CPQ6ZMV5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
PPP4R3CPQ6ZMV5 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 RNA5SP500-201ENST00000364486 119 ntBASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 RNA5SP33-201ENST00000516687 98 ntBASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPP4R3CPQ6ZMV5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PPP4R3CPQ6ZMV5 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
PPP4R3CPQ6ZMV5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
PPP4R3CPQ6ZMV5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PPP4R3CPQ6ZMV5 RPS29P10-201ENST00000439197 166 ntBASIC6.51□□□□□ -1.37
PPP4R3CPQ6ZMV5 AC090255.1-201ENST00000495779 349 ntBASIC6.51□□□□□ -1.37
PPP4R3CPQ6ZMV5 HMGN2P6-201ENST00000551091 273 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 223.3 ms