Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MIR514B-201ENST00000516774 80 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 MIR4528-201ENST00000577763 90 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AC103987.3-201ENST00000582071 292 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AC107304.1-201ENST00000604229 296 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AC123912.5-201ENST00000605470 343 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AL359314.1-201ENST00000616913 261 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 YWHAEP7-203ENST00000622054 312 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 RNA5SP126-201ENST00000365092 109 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 RNU6-348P-201ENST00000384386 107 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AL023284.1-201ENST00000403956 276 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 MIR1262-201ENST00000408276 93 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 SRIP3-201ENST00000413200 219 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 HMGN2P38-201ENST00000423806 265 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 IFNA20P-201ENST00000436840 528 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AC243964.1-201ENST00000441814 261 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AL360221.1-201ENST00000445989 335 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 RPL23AP3-201ENST00000453844 468 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 RNU6-956P-201ENST00000458868 103 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 BNIP3P16-201ENST00000589779 534 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AC243960.4-201ENST00000600532 288 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AC005034.5-201ENST00000604219 466 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 AL627230.6-201ENST00000611129 280 ntBASIC1.85□□□□□ -2.11
NIPAL3Q6P499 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NIPAL3Q6P499 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 RNU6-428P-201ENST00000362942 107 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 RNU6-1285P-201ENST00000363480 105 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 SNORA67.3-201ENST00000384366 140 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 RN7SKP192-201ENST00000411291 327 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 AL158823.1-201ENST00000418441 478 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 AL356010.1-201ENST00000456364 102 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 MTND3P5-201ENST00000512798 333 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 RN7SKP219-201ENST00000516825 296 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 MIR3941-201ENST00000582572 103 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 AC002044.1-201ENST00000606707 158 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 Z69908.1-201ENST00000622603 247 ntBASIC1.84□□□□□ -2.11
NIPAL3Q6P499 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NIPAL3Q6P499 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
NIPAL3Q6P499 AC009487.4-201ENST00000624969 3585 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
NIPAL3Q6P499 RNU6-266P-201ENST00000364225 107 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 RNU6-336P-201ENST00000364891 107 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 RNU6-517P-201ENST00000384362 110 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 MIR676-201ENST00000390702 67 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 RN7SKP284-201ENST00000411002 343 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.83□□□□□ -2.12
NIPAL3Q6P499 RPL23AP6-201ENST00000446637 472 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AL031274.1-201ENST00000450334 232 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 RNU7-63P-201ENST00000459054 62 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 RPL21P99-201ENST00000480369 423 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AC022447.4-201ENST00000504053 364 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.83□□□□□ -2.12
NIPAL3Q6P499 SNORA25.17-201ENST00000517184 124 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AC069113.1-201ENST00000517763 267 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.83□□□□□ -2.12
NIPAL3Q6P499 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AP005435.4-201ENST00000529514 284 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AP000873.5-201ENST00000533906 236 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 MIR4299-201ENST00000577899 72 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.83□□□□□ -2.12
NIPAL3Q6P499 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AC008749.1-201ENST00000597650 306 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AL109918.3-201ENST00000603072 338 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AC073648.5-201ENST00000603502 305 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AL034555.1-201ENST00000604816 211 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AC018889.1-201ENST00000605372 397 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.83□□□□□ -2.12
NIPAL3Q6P499 AC104073.3-201ENST00000610942 955 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 MIR219B-201ENST00000637023 88 ntBASIC1.83□□□□□ -2.12
NIPAL3Q6P499 ELL2P3-201ENST00000457883 1602 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms