Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
LETMD1Q6P1Q0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LETMD1Q6P1Q0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
LETMD1Q6P1Q0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 RNA5SP167-201ENST00000365461 116 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 SNORA11B-201ENST00000408175 129 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 YPEL5P1-201ENST00000419731 367 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 TBCAP1-201ENST00000436520 327 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 AC009237.7-201ENST00000447357 229 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 RPL39P29-201ENST00000447779 157 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 AC005042.3-201ENST00000453230 174 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 RN7SL860P-201ENST00000473738 223 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 RPL30P12-201ENST00000474666 353 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 RNU7-200P-201ENST00000516105 62 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 RNU6-346P-201ENST00000516288 111 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 MRPS18CP4-201ENST00000535821 231 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 AC021739.1-201ENST00000559631 174 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 AC233702.2-202ENST00000562547 291 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 MIR486-1-201ENST00000612171 68 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 U7.8-201ENST00000619968 63 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 AL359854.1-201ENST00000614203 1594 ntBASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.83□□□□□ -1.8
LETMD1Q6P1Q0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 ADAM3A-203ENST00000461344 2157 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 RNU5F-3P-201ENST00000363767 117 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 Y_RNA.308-201ENST00000365043 101 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 RNU6-804P-201ENST00000384286 107 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 MIR613-201ENST00000385248 95 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 RNA5SP390-201ENST00000410191 113 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 AC099548.1-201ENST00000421443 426 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 BPY2DP-201ENST00000422208 265 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 FTH1P6-201ENST00000430768 320 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 RPS23P7-201ENST00000466210 444 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 MTND5P41-201ENST00000517498 206 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 MIR3144-201ENST00000579460 79 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 AC090897.2-201ENST00000581715 130 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 AC005828.6-201ENST00000606610 232 ntBASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LETMD1Q6P1Q0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 ZNF204P-201ENST00000416749 2397 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 RNU6-270P-201ENST00000364131 105 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 Y_RNA.217-201ENST00000364214 105 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 RNA5SP130-201ENST00000364431 114 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 SNORA72.2-201ENST00000365028 127 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 Y_RNA.435-201ENST00000384095 112 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 RNU6-622P-201ENST00000384272 103 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 Y_RNA.597-201ENST00000410463 100 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 RNU6-394P-201ENST00000410735 107 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AC016397.1-201ENST00000412463 242 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AL500522.2-201ENST00000448562 343 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 Y_RNA.641-201ENST00000459414 105 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AC084357.1-201ENST00000473404 255 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AC074133.1-201ENST00000515696 183 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AP004242.1-201ENST00000533701 349 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AC011602.1-201ENST00000546484 331 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 YPEL5P3-201ENST00000547227 352 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 MIR4308-201ENST00000580634 81 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AC024220.1-201ENST00000603675 484 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AC004832.4-201ENST00000608952 331 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AC104465.1-201ENST00000611365 139 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 AC110491.1-201ENST00000562191 2010 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 MTND5P35-201ENST00000557537 1720 ntBASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LETMD1Q6P1Q0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LETMD1Q6P1Q0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LETMD1Q6P1Q0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.8□□□□□ -1.8
LETMD1Q6P1Q0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.8□□□□□ -1.8
LETMD1Q6P1Q0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.8□□□□□ -1.8
LETMD1Q6P1Q0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms