Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 PHBP14-201ENST00000512887 367 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-1338P-201ENST00000516328 91 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 Y_RNA.700-201ENST00000516806 100 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 MRPS36P4-201ENST00000534436 298 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 MIR4325-201ENST00000583049 90 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 AC020895.1-201ENST00000595362 272 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 AC073657.2-201ENST00000605661 303 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 AC240442.1-201ENST00000616055 283 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 U4.6-201ENST00000621618 127 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 RNA5SP374-201ENST00000362939 125 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-280P-201ENST00000364145 104 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-843P-201ENST00000384454 104 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 AL079342.1-201ENST00000401460 267 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 NDUFB4P6-201ENST00000436819 366 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 MTATP6P7-201ENST00000453315 681 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 U3.44-201ENST00000458938 192 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 UBE2DNL-203ENST00000474922 222 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 RN7SL504P-201ENST00000494496 287 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-1282P-201ENST00000516735 96 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-703P-201ENST00000516946 107 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 EIF4BP1-201ENST00000554881 351 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 AC023824.2-201ENST00000566185 400 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 MIR3690-201ENST00000580266 75 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 AL450472.1-202ENST00000637286 180 ntBASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF40BQ6NWY9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF40BQ6NWY9 AL079305.1-201ENST00000623159 3008 ntBASIC4.4□□□□□ -1.7
PRPF40BQ6NWY9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.4□□□□□ -1.7
PRPF40BQ6NWY9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF40BQ6NWY9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF40BQ6NWY9 AL133412.1-201ENST00000380194 2992 ntBASIC4.4□□□□□ -1.7
PRPF40BQ6NWY9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.4□□□□□ -1.7
PRPF40BQ6NWY9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
PRPF40BQ6NWY9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-1266P-201ENST00000362794 105 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.785-201ENST00000384290 109 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 MIR32-201ENST00000384965 70 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 RNU2-20P-201ENST00000410425 191 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 RPL26P27-201ENST00000414397 437 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 RPS26P21-201ENST00000475397 348 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 RNU4-71P-201ENST00000516258 113 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 SCARNA24.2-201ENST00000516968 130 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 SNORA81.3-201ENST00000517283 198 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 MIR4659A-201ENST00000580269 81 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 KLKP1-201ENST00000595979 403 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 BX284668.6-201ENST00000606899 438 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 FTX_3.1-201ENST00000610451 147 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 AC011476.5-201ENST00000615594 130 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 AL353743.1-202ENST00000431724 1695 ntBASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF40BQ6NWY9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 FAM35BP-202ENST00000497389 3337 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 AC022336.2-201ENST00000568966 2538 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.29-201ENST00000362570 113 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-1301P-201ENST00000362724 104 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-879P-201ENST00000364328 108 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.539-201ENST00000384635 107 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 MIR1289-1-201ENST00000408836 144 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 RPL23AP75-201ENST00000491601 451 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 RNU5B-3P-201ENST00000516601 115 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 RN7SKP40-201ENST00000517211 242 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 AC130289.1-201ENST00000577321 73 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 RMST_6.1-201ENST00000611980 203 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 AC024581.2-201ENST00000619986 252 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 AC091903.1-201ENST00000624322 454 ntBASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF40BQ6NWY9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms