Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC107953.1-201ENST00000522216 297 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.9□□□□□ -2.11
ATL3Q6DD88 MIR4524B-201ENST00000581569 115 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.9□□□□□ -2.11
ATL3Q6DD88 AL590229.1-201ENST00000603497 542 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC109347.2-201ENST00000610220 349 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC009318.2-201ENST00000610917 651 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AL159153.1-201ENST00000619688 317 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC022079.1-201ENST00000621546 602 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 Z69720.2-201ENST00000624755 279 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 U6.114-201ENST00000636407 96 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 MIR3974-201ENST00000637126 96 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNA5SP432-201ENST00000362480 116 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU6-1287P-201ENST00000362914 107 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 Y_RNA.159-201ENST00000363674 87 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU6-715P-201ENST00000365204 103 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU6-1032P-201ENST00000384100 107 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU6-456P-201ENST00000384493 107 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU6-1060P-201ENST00000384664 107 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU6-606P-201ENST00000384721 111 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 AL591034.2-201ENST00000402839 359 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU4-26P-201ENST00000410270 107 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU2-23P-201ENST00000410545 195 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU2-48P-201ENST00000410694 191 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 AC090960.1-201ENST00000421072 306 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RPL31P63-201ENST00000422565 375 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 AL365400.1-201ENST00000431854 640 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 AC007969.2-201ENST00000441891 191 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 C1DP4-201ENST00000455429 424 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 snoU13.26-201ENST00000459452 105 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU1-41P-201ENST00000516161 162 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU2-53P-201ENST00000516257 147 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU1-48P-201ENST00000516400 162 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 Y_RNA.695-201ENST00000516715 107 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU6-430P-201ENST00000517078 107 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.89□□□□□ -2.11
ATL3Q6DD88 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.89□□□□□ -2.11
ATL3Q6DD88 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.89□□□□□ -2.11
ATL3Q6DD88 AC025449.1-201ENST00000603896 529 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 AC072046.2-201ENST00000618366 268 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 uc_338.11-201ENST00000619132 160 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 AC009509.4-201ENST00000619202 509 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 Z69908.1-201ENST00000622603 247 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 ZNF702P-202ENST00000434269 1966 ntBASIC1.89□□□□□ -2.11
ATL3Q6DD88 RNU6-78P-201ENST00000362897 107 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 BTF3L4P1-201ENST00000413813 468 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.88□□□□□ -2.11
ATL3Q6DD88 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.88□□□□□ -2.11
ATL3Q6DD88 AC010486.3-201ENST00000511602 785 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ATL3Q6DD88 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.88□□□□□ -2.11
ATL3Q6DD88 SNORA4.4-201ENST00000515921 135 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 MIR4703-201ENST00000577728 79 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 AC110760.3-201ENST00000598794 467 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 AC119751.7-201ENST00000600494 245 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 AC008945.2-201ENST00000606056 604 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 AC068944.2-201ENST00000610373 403 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 AC026585.1-201ENST00000619582 524 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 U4.7-201ENST00000638126 106 ntBASIC1.88□□□□□ -2.11
ATL3Q6DD88 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ATL3Q6DD88 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.87□□□□□ -2.11
ATL3Q6DD88 RNU1-23P-201ENST00000363361 144 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 Y_RNA.324-201ENST00000365165 102 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ATL3Q6DD88 MIR29C-201ENST00000385231 88 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 U8.13-201ENST00000390842 128 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 AL390237.1-201ENST00000404226 1415 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 POLHP1-201ENST00000411806 470 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 OR9R1P-201ENST00000412200 877 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 AL158823.1-201ENST00000418441 478 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 MTND4P32-201ENST00000437189 1237 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 HMGB1P31-201ENST00000437242 427 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.87□□□□□ -2.11
ATL3Q6DD88 RPL23AP6-201ENST00000446637 472 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 MTND1P27-201ENST00000451117 902 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 AL137159.1-201ENST00000452808 512 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 RPL23AP3-201ENST00000453844 468 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 AC022364.2-201ENST00000457963 554 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.87□□□□□ -2.11
ATL3Q6DD88 RPS29P15-201ENST00000458329 171 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 GMFBP1-201ENST00000467831 427 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.87□□□□□ -2.11
ATL3Q6DD88 AL121594.1-201ENST00000475906 575 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 LRRC34P2-201ENST00000514850 553 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 RNU6-1178P-201ENST00000516674 107 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 CBX3P4-201ENST00000538909 354 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ATL3Q6DD88 MTCO3P23-201ENST00000561363 289 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 ELOCP5-201ENST00000604924 333 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms