Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RAB28P5-201ENST00000427490 651 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 Y_RNA.686-201ENST00000516548 134 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 RNU7-143P-201ENST00000516781 65 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 RNU6-1234P-201ENST00000516877 103 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 SNORA70.24-201ENST00000517233 118 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 YPEL5P3-201ENST00000547227 352 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF43Q68DV7 UBL5P4-201ENST00000562584 236 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 AC005176.2-201ENST00000596933 147 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF43Q68DV7 AL391261.4-201ENST00000616012 481 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF43Q68DV7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF43Q68DV7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF43Q68DV7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF43Q68DV7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF43Q68DV7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF43Q68DV7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF43Q68DV7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF43Q68DV7 Y_RNA.43-201ENST00000362670 111 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 RNA5SP197-201ENST00000363357 119 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 RNU6-741P-201ENST00000383889 107 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 RNU6-1074P-201ENST00000383995 104 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 SNORA70E-201ENST00000384492 135 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 RNU6-837P-201ENST00000391056 108 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 HLFP1-201ENST00000402375 499 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 AC079780.1-201ENST00000428259 207 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 AC110768.1-201ENST00000509222 400 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 RNU6-191P-201ENST00000516295 94 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF43Q68DV7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF43Q68DV7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF43Q68DV7 AC096577.2-201ENST00000611455 153 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 AL121772.2-201ENST00000614331 297 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 BMS1P21-201ENST00000634565 365 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 AC241585.2-209ENST00000638217 143 ntBASIC4.17□□□□□ -1.74
RNF43Q68DV7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF43Q68DV7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF43Q68DV7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF43Q68DV7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF43Q68DV7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RNF43Q68DV7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF43Q68DV7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF43Q68DV7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF43Q68DV7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF43Q68DV7 RNU4-80P-201ENST00000363200 141 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 RNU6-105P-201ENST00000363909 104 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 Y_RNA.245-201ENST00000364493 95 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 SNORA73.2-201ENST00000364946 201 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 RNU6-213P-201ENST00000384051 104 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 RNU6-1145P-201ENST00000384246 107 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 SNORA20-201ENST00000384662 132 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 RNU6-239P-201ENST00000390990 99 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RNF43Q68DV7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF43Q68DV7 RPS15AP5-201ENST00000436276 388 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 Z82210.1-201ENST00000440037 231 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 AC092798.1-201ENST00000458542 409 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 RNU6-1211P-201ENST00000459179 105 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 RN7SL93P-201ENST00000463035 293 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF43Q68DV7 SNORA25.12-201ENST00000516202 82 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF43Q68DV7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF43Q68DV7 AL008718.3-201ENST00000610217 321 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 MIR6868-201ENST00000611215 58 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 AC068831.7-201ENST00000616954 363 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 AL773545.4-201ENST00000637262 310 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 AL513478.4-201ENST00000641636 310 ntBASIC4.16□□□□□ -1.74
RNF43Q68DV7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF43Q68DV7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RNF43Q68DV7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF43Q68DV7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
RNF43Q68DV7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNF43Q68DV7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.15□□□□□ -1.74
RNF43Q68DV7 AL139811.1-201ENST00000424779 2299 ntBASIC4.15□□□□□ -1.74
RNF43Q68DV7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.15□□□□□ -1.74
RNF43Q68DV7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNF43Q68DV7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF43Q68DV7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF43Q68DV7 MARK2P15-201ENST00000432204 2186 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RNF43Q68DV7 MIR423-201ENST00000362201 94 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 Y_RNA.121-201ENST00000363309 113 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 SNORA40.19-201ENST00000390846 128 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 HMGN2P8-201ENST00000391458 268 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 CKS1BP5-201ENST00000434172 273 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF43Q68DV7 RNU6-966P-201ENST00000516479 104 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 RNU6-572P-201ENST00000516724 80 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF43Q68DV7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.15□□□□□ -1.75
RNF43Q68DV7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.15□□□□□ -1.75
RNF43Q68DV7 AL121603.1-201ENST00000553815 142 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 AL161713.1-201ENST00000555538 145 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 MIR3145-201ENST00000580727 82 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 AC022441.3-201ENST00000605737 136 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 AL354798.1-201ENST00000622505 329 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 AC008873.1-201ENST00000625051 138 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms