Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 U2.10-201ENST00000620268 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 AL109809.4-201ENST00000603520 2185 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 MAPK10-373ENST00000641983 6772 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AC110491.1-201ENST00000562191 2010 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 FAM35DP-201ENST00000323387 2712 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 SRP72P2-201ENST00000344851 1979 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 RNA5SP322-201ENST00000363617 119 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 RNU6-1141P-201ENST00000364520 107 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 Y_RNA.400-201ENST00000383963 111 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 Y_RNA.498-201ENST00000384460 102 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 RNU1-89P-201ENST00000384592 164 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 Y_RNA.568-201ENST00000384742 113 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 RPL26P27-201ENST00000414397 437 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 BTF3P11-201ENST00000426582 477 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AL162725.1-201ENST00000435405 301 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AL356535.1-201ENST00000440335 398 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 RN7SL860P-201ENST00000473738 223 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 MIR2114-201ENST00000516645 80 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 MRPL49P2-201ENST00000521066 465 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AC018448.1-201ENST00000552843 316 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AC233702.2-202ENST00000562547 291 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AC023043.4-201ENST00000612081 449 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AC004467.1-201ENST00000615678 330 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AL591424.2-201ENST00000617023 128 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 MIR6134-201ENST00000617606 109 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AC112200.1-201ENST00000625015 234 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 MTND5P35-201ENST00000557537 1720 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.79□□□□□ -1.64
RNF20Q5VTR2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF20Q5VTR2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RNF20Q5VTR2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF20Q5VTR2 RNU6-1285P-201ENST00000363480 105 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 AC016397.1-201ENST00000412463 242 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 FTH1P6-201ENST00000430768 320 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 AC112220.1-201ENST00000434628 355 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF20Q5VTR2 SNORA31.9-201ENST00000516429 84 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 Vault.1-201ENST00000516474 102 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 SNORA31.23-201ENST00000517219 133 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 AC005255.1-201ENST00000593748 216 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 DEFB117-201ENST00000602356 141 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 AL133393.1-201ENST00000603277 287 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 AL008718.3-201ENST00000610217 321 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 MIR6868-201ENST00000611215 58 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 MIR6716-201ENST00000613413 80 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 AL365222.1-201ENST00000614661 98 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 AC091932.3-201ENST00000624223 323 ntBASIC4.78□□□□□ -1.64
RNF20Q5VTR2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF20Q5VTR2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 Y_RNA.7-201ENST00000362352 102 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 RNU6-600P-201ENST00000362524 99 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 RNU6-818P-201ENST00000364837 108 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 AC244670.1-201ENST00000436879 112 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 AC010618.1-201ENST00000469924 477 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 AL121594.1-201ENST00000475906 575 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 RNA5SP272-201ENST00000516095 111 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 RNU6-155P-201ENST00000516347 100 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 RNA5SP54-201ENST00000516951 92 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 IPO8P1-201ENST00000455509 3109 ntBASIC4.77□□□□□ -1.65
RNF20Q5VTR2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF20Q5VTR2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF20Q5VTR2 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 Y_RNA.179-201ENST00000363844 90 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 Y_RNA.215-201ENST00000364204 112 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 Y_RNA.238-201ENST00000364441 102 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 RNU6-1280P-201ENST00000365211 107 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RNF20Q5VTR2 RN7SKP61-201ENST00000410642 295 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 RAB28P5-201ENST00000427490 651 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 SEPT7P4-201ENST00000437076 306 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 HMGB1P37-201ENST00000439613 609 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 HMGB3P8-201ENST00000449709 577 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF20Q5VTR2 RPS23P7-201ENST00000466210 444 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 RPL30P5-201ENST00000494923 336 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms