Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC012213.4-201ENST00000606457 354 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 RNU4-32P-201ENST00000363404 141 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 RNU6-1331P-201ENST00000363658 106 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 SNORD14C-201ENST00000365382 88 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 MIR597-201ENST00000384968 97 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 RNU6-269P-201ENST00000391077 97 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 FABP5P14-201ENST00000437273 393 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 U7.7-201ENST00000459276 60 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 RNU6-1095P-201ENST00000516148 108 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 AC005951.2-201ENST00000576282 495 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 AC093648.1-201ENST00000623546 606 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 MIR18A-201ENST00000362310 71 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 RPL26P27-201ENST00000414397 437 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 RAC1P8-201ENST00000427086 527 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 BNIP3P27-201ENST00000599991 412 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 MIR103A1-201ENST00000362165 78 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 RNU5A-1-201ENST00000362698 116 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 RNU6-821P-201ENST00000390995 107 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 NANOGP2-201ENST00000435391 727 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AL606662.1-201ENST00000445763 553 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 RNU6-917P-201ENST00000516294 104 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 RNU6-782P-201ENST00000516852 104 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 SNORA31.17-201ENST00000516953 127 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AL121579.1-201ENST00000555129 305 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AL391813.1-201ENST00000603098 260 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 RNU6-156P-201ENST00000621869 107 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AL078595.3-201ENST00000623815 1166 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 CASC19-280ENST00000642102 1351 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 MIR325-201ENST00000385260 98 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AC123900.1-201ENST00000420390 96 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 AC112693.2-201ENST00000556538 232 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 SNORA77B-201ENST00000578179 125 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 PART1_2.1-201ENST00000612397 250 ntBASIC-0.26□□□□□ -2.45
VPS13DQ5THJ4 RNU6-486P-201ENST00000363116 107 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 RNU6-877P-201ENST00000383868 107 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC007435.1-201ENST00000421086 415 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 BUD31P2-201ENST00000449374 300 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 ELOCP24-201ENST00000456370 334 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC114981.1-201ENST00000503897 678 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC104136.1-201ENST00000512969 394 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AP000811.1-201ENST00000603803 651 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC015726.2-201ENST00000620112 122 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AL031667.3-201ENST00000620124 655 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 RNA5SP264-201ENST00000363115 107 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 RNU6-815P-201ENST00000384080 113 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 SNORD116-13-201ENST00000384408 92 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 MTND4P11-201ENST00000417020 1058 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 MTATP6P23-201ENST00000440153 476 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC004775.1-201ENST00000607389 753 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC024940.5-201ENST00000622889 474 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 MTND5P32-201ENST00000560711 1802 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 RNU7-21P-201ENST00000459430 62 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AL049714.1-201ENST00000466686 347 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 RPL30P1-201ENST00000488676 339 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 AC005176.2-201ENST00000596933 147 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 RMST_4.1-201ENST00000616886 107 ntBASIC-0.27□□□□□ -2.45
VPS13DQ5THJ4 SNORD99-201ENST00000408612 74 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 U4.2-201ENST00000618561 85 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AL133370.2-201ENST00000619934 439 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 RNA5SP259-201ENST00000365541 109 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AC010587.2-201ENST00000511727 448 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms