Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 RNU6-944P-201ENST00000364023 107 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 RNU6-1078P-201ENST00000364522 103 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 RNU6-296P-201ENST00000384608 107 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
NUP188Q5SRE5 AL133475.1-201ENST00000404414 305 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 SNRPGP12-201ENST00000449481 213 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 AC048346.1-201ENST00000510247 144 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.11□□□□□ -2.39
NUP188Q5SRE5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.11□□□□□ -2.39
NUP188Q5SRE5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.11□□□□□ -2.39
NUP188Q5SRE5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.11□□□□□ -2.39
NUP188Q5SRE5 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 AL158163.2-201ENST00000619110 700 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 U6.101-201ENST00000637707 76 ntBASIC0.11□□□□□ -2.39
NUP188Q5SRE5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.11□□□□□ -2.39
NUP188Q5SRE5 AC138623.1-201ENST00000418060 216 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC063976.4-201ENST00000421971 163 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AL589872.1-201ENST00000426602 288 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 MTND1P28-201ENST00000435623 950 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC098869.1-201ENST00000481627 292 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 MTND1P3-201ENST00000484956 952 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 RNU2-53P-201ENST00000516257 147 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC007834.2-201ENST00000536310 343 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 EIF1P4-201ENST00000572664 335 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC005951.2-201ENST00000576282 495 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC107952.2-201ENST00000606048 486 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC093648.1-201ENST00000623546 606 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC130509.1-201ENST00000464158 433 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 ACA59.2-201ENST00000517061 156 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 HMGB1P33-201ENST00000563485 527 ntBASIC0.1□□□□□ -2.39
NUP188Q5SRE5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.1□□□□□ -2.39
NUP188Q5SRE5 RNU6-743P-201ENST00000364151 106 ntBASIC0.09□□□□□ -2.4
NUP188Q5SRE5 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.09□□□□□ -2.4
NUP188Q5SRE5 AC002429.1-201ENST00000437672 148 ntBASIC0.09□□□□□ -2.4
NUP188Q5SRE5 MTCYBP43-201ENST00000513621 740 ntBASIC0.09□□□□□ -2.4
NUP188Q5SRE5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.09□□□□□ -2.4
NUP188Q5SRE5 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.09□□□□□ -2.4
NUP188Q5SRE5 AC025423.5-201ENST00000550230 219 ntBASIC0.09□□□□□ -2.4
NUP188Q5SRE5 AL603758.1-201ENST00000618654 241 ntBASIC0.09□□□□□ -2.4
NUP188Q5SRE5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.08□□□□□ -2.4
NUP188Q5SRE5 MIR101-1-201ENST00000362265 75 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 MIR520A-201ENST00000384862 85 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 MTND2P4-201ENST00000445034 1004 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 AC012308.1-201ENST00000451232 178 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 AC048334.1-201ENST00000477975 159 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
NUP188Q5SRE5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.08□□□□□ -2.4
NUP188Q5SRE5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.08□□□□□ -2.4
NUP188Q5SRE5 SNORA3.4-201ENST00000515969 96 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 RNU6-840P-201ENST00000517275 65 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.08□□□□□ -2.4
NUP188Q5SRE5 MRPS36P5-201ENST00000551909 298 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 AC093249.1-201ENST00000567049 203 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 VN1R83P-201ENST00000595685 445 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.08□□□□□ -2.4
NUP188Q5SRE5 AC019226.1-201ENST00000625666 515 ntBASIC0.08□□□□□ -2.4
NUP188Q5SRE5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 MTND2P21-201ENST00000436242 1042 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 BRK1P2-201ENST00000442875 223 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AL606662.1-201ENST00000445763 553 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC092001.1-201ENST00000453012 261 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC013828.1-201ENST00000481845 158 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC112206.3-201ENST00000514578 389 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC091489.2-201ENST00000566263 604 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC004853.1-201ENST00000604902 698 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 RNU6-87P-201ENST00000607561 108 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 RMST_4.1-201ENST00000616886 107 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 RNA5SP98-201ENST00000363158 137 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 Y_RNA.488-201ENST00000384403 102 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 SNORD99-201ENST00000408612 74 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 MTCO3P1-205ENST00000422088 832 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 MTCO2P12-201ENST00000427426 682 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC104651.1-201ENST00000427559 735 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.07□□□□□ -2.4
NUP188Q5SRE5 MTCO1P31-201ENST00000506355 492 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC010460.2-201ENST00000509054 677 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 RNU6-165P-201ENST00000517170 99 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AC104417.1-201ENST00000523974 751 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 AP003392.2-201ENST00000527269 208 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms