Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SF3B3Q15393 GABRG2-229ENST00000641017 3628 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.46□□□□□ -1.86
SF3B3Q15393 AC092435.3-201ENST00000565538 3654 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
SF3B3Q15393 RNU6-384P-201ENST00000364900 104 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 MIR568-201ENST00000385036 95 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 AL445529.1-201ENST00000398713 389 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 MIR1290-201ENST00000408735 78 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 AL030996.1-201ENST00000411430 235 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 RPL27AP8-201ENST00000424277 446 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 AL356867.1-201ENST00000429623 299 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 AL133396.1-201ENST00000432048 687 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.45□□□□□ -1.86
SF3B3Q15393 RPL12P25-201ENST00000455592 494 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 RNU6-764P-201ENST00000516396 105 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 AC023442.1-201ENST00000531247 422 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SF3B3Q15393 AP002826.1-201ENST00000608835 315 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 AC243829.7-201ENST00000633081 225 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.45□□□□□ -1.86
SF3B3Q15393 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SF3B3Q15393 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.45□□□□□ -1.86
SF3B3Q15393 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.45□□□□□ -1.86
SF3B3Q15393 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SF3B3Q15393 MTND5P27-201ENST00000428871 1720 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 AC092593.1-201ENST00000515413 1815 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SF3B3Q15393 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SF3B3Q15393 MIR412-201ENST00000362142 91 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 RNU6-859P-201ENST00000362728 107 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 Y_RNA.80-201ENST00000362996 102 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 RNU1-115P-201ENST00000365329 160 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 RNU6-596P-201ENST00000365395 98 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 RNU6-574P-201ENST00000384265 107 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 RNU6-196P-201ENST00000384315 107 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 RN7SKP58-201ENST00000411010 305 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.44□□□□□ -1.86
SF3B3Q15393 AC011816.1-201ENST00000441346 546 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 NDUFB1P2-201ENST00000449477 176 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.44□□□□□ -1.86
SF3B3Q15393 PCMTD1P1-201ENST00000455560 355 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 BTF3P15-201ENST00000455606 336 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 RPL30P14-201ENST00000482744 348 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 AC018437.1-201ENST00000492214 406 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.44□□□□□ -1.86
SF3B3Q15393 AC113155.1-201ENST00000511141 769 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 AC109446.1-201ENST00000566172 220 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 AC010205.1-201ENST00000616668 449 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 AL162373.1-201ENST00000620433 407 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.44□□□□□ -1.86
SF3B3Q15393 IGHVIII-44-202ENST00000636235 289 ntBASIC3.44□□□□□ -1.86
SF3B3Q15393 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.43□□□□□ -1.86
SF3B3Q15393 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SF3B3Q15393 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.43□□□□□ -1.86
SF3B3Q15393 Y_RNA.245-201ENST00000364493 95 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 Y_RNA.428-201ENST00000384078 102 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 Y_RNA.527-201ENST00000384573 102 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 MIR196B-201ENST00000384852 84 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 MIR512-1-201ENST00000384913 84 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 RNU2-33P-201ENST00000410344 192 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 RNU6-174P-201ENST00000410406 106 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 AL096701.2-201ENST00000416920 238 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 MTCYBP10-201ENST00000424905 650 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.43□□□□□ -1.86
SF3B3Q15393 MTCYBP9-201ENST00000431021 303 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.43□□□□□ -1.86
SF3B3Q15393 UQCRHP3-201ENST00000451503 251 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 RPS3P1-201ENST00000456781 192 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 RPS26P21-201ENST00000475397 348 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 AC116655.1-201ENST00000508324 901 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 MTCO2P24-201ENST00000515611 426 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 SNORD116.3-201ENST00000517176 78 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 AC068657.1-201ENST00000520807 306 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 AC005014.2-201ENST00000607795 599 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 AC090115.4-201ENST00000609970 188 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 AC087588.2-201ENST00000617667 426 ntBASIC3.43□□□□□ -1.86
SF3B3Q15393 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.43□□□□□ -1.86
SF3B3Q15393 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SF3B3Q15393 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.43□□□□□ -1.86
SF3B3Q15393 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SF3B3Q15393 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SF3B3Q15393 AC093908.1-201ENST00000623125 8092 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 SNORD14B-201ENST00000364533 90 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 RNU6-741P-201ENST00000383889 107 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 RPS4XP3-201ENST00000398541 413 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 RNU6-325P-201ENST00000411132 105 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.42□□□□□ -1.86
SF3B3Q15393 AL513043.1-201ENST00000439124 535 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 DAP3P1-201ENST00000441522 278 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 AL590664.1-201ENST00000448065 339 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 AC008571.1-201ENST00000467232 300 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 RNA5SP290-201ENST00000517133 127 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 SNORA31.26-201ENST00000517250 137 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 COX6CP5-201ENST00000527162 228 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.42□□□□□ -1.86
SF3B3Q15393 TRAV32-201ENST00000553993 340 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 SUB1P3-201ENST00000564581 315 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 MIR4503-201ENST00000582187 83 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms