Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
FOXC1Q12948 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
FOXC1Q12948 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXC1Q12948 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FOXC1Q12948 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXC1Q12948 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FOXC1Q12948 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FOXC1Q12948 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXC1Q12948 MIR133A2-201ENST00000347538 102 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 MIR372-201ENST00000362225 67 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 SNORA71.3-201ENST00000362582 128 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 RNU2-70P-201ENST00000410718 179 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXC1Q12948 AL450023.3-201ENST00000440592 271 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 RPL23AP93-201ENST00000440847 484 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 RPL37P4-201ENST00000448908 268 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXC1Q12948 RN7SL441P-201ENST00000492388 296 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 RPL30P5-201ENST00000494923 336 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 HMGB1P22-201ENST00000505315 124 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 SNORD77.4-201ENST00000516158 81 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 RNU6-904P-201ENST00000516206 101 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 SNORA18.4-201ENST00000516440 124 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 RNU1-117P-201ENST00000517041 158 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXC1Q12948 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXC1Q12948 MIR6839-201ENST00000620425 113 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 AC112484.5-201ENST00000624189 228 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 MIR492-201ENST00000638676 116 ntBASIC4.49□□□□□ -1.69
FOXC1Q12948 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXC1Q12948 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
FOXC1Q12948 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
FOXC1Q12948 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXC1Q12948 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXC1Q12948 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
FOXC1Q12948 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
FOXC1Q12948 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXC1Q12948 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXC1Q12948 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXC1Q12948 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXC1Q12948 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXC1Q12948 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXC1Q12948 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXC1Q12948 STX3-208ENST00000641815 3236 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 AP001029.2-203ENST00000589795 4910 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXC1Q12948 AC125257.1-201ENST00000560400 2930 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
FOXC1Q12948 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXC1Q12948 MIR302B-201ENST00000362188 73 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 RNU1-59P-201ENST00000364829 162 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 U8.12-201ENST00000384701 133 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 SNORA48.4-201ENST00000391089 134 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 AC008134.1-201ENST00000420943 193 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 AC099548.1-201ENST00000421443 426 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 AC027124.2-201ENST00000428249 105 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 H2AFZP5-201ENST00000446960 382 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 RPL23AP62-201ENST00000463396 453 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 RPS29P2-201ENST00000479278 136 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 AC139453.2-201ENST00000487255 133 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 RPL23AP54-201ENST00000495129 419 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXC1Q12948 MIR5009-201ENST00000578736 100 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 AL365205.2-201ENST00000594586 68 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXC1Q12948 AC006971.1-201ENST00000407916 4486 ntBASIC4.48□□□□□ -1.69
FOXC1Q12948 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXC1Q12948 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXC1Q12948 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXC1Q12948 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXC1Q12948 AC002543.1-201ENST00000299783 1954 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
FOXC1Q12948 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXC1Q12948 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
FOXC1Q12948 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXC1Q12948 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
FOXC1Q12948 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXC1Q12948 RNU6-1280P-201ENST00000365211 107 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 MIR200C-201ENST00000384980 68 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 MIR548B-201ENST00000385247 97 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
FOXC1Q12948 PTMAP5-201ENST00000393073 333 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 EI24P2-201ENST00000397776 1076 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 Z98745.1-201ENST00000402553 494 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 HMGN2P30-201ENST00000423237 256 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 RNU6-113P-201ENST00000516653 101 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 AP004371.1-201ENST00000525240 214 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 SNORA74C-1-201ENST00000580726 201 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 AL451007.1-201ENST00000595491 289 ntBASIC4.47□□□□□ -1.69
FOXC1Q12948 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
FOXC1Q12948 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXC1Q12948 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXC1Q12948 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXC1Q12948 ASNSP1-201ENST00000518311 1939 ntBASIC4.46□□□□□ -1.69
FOXC1Q12948 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXC1Q12948 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXC1Q12948 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms