Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU6-29P-201ENST00000384637 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-9-201ENST00000384776 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-33P-201ENST00000384793 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 SNORA16.2-201ENST00000390991 127 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-482P-201ENST00000391068 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 SNORA40.18-201ENST00000391200 128 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 USP9YP27-201ENST00000418455 438 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RPS3AP44-201ENST00000425466 790 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.24□□□□□ -2.05
GABPAQ06546 SRRM1P2-201ENST00000464531 1192 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 AC018437.1-201ENST00000492214 406 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 CKS1BP2-201ENST00000497342 240 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 AC107401.1-201ENST00000503426 685 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.24□□□□□ -2.05
GABPAQ06546 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.24□□□□□ -2.05
GABPAQ06546 AL137161.1-201ENST00000532231 390 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.24□□□□□ -2.05
GABPAQ06546 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.24□□□□□ -2.05
GABPAQ06546 AC103987.3-201ENST00000582071 292 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 AL136363.2-201ENST00000604173 851 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-6P-201ENST00000606623 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 AC093783.1-201ENST00000612976 329 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 AC022418.1-201ENST00000624118 445 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
GABPAQ06546 AL139276.1-201ENST00000311910 1001 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 RNU6-527P-201ENST00000363425 104 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 RNU4-24P-201ENST00000364565 139 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 RNU4-75P-201ENST00000364621 146 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 MIR9-3-201ENST00000385084 90 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.23□□□□□ -2.05
GABPAQ06546 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.23□□□□□ -2.05
GABPAQ06546 AC073415.1-201ENST00000449240 153 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 AL139109.1-201ENST00000455491 297 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.23□□□□□ -2.05
GABPAQ06546 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.23□□□□□ -2.05
GABPAQ06546 SNORA31.23-201ENST00000517219 133 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 AP001596.2-201ENST00000608410 312 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 AC017083.3-201ENST00000609955 700 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 MIR5739-201ENST00000619803 80 ntBASIC2.23□□□□□ -2.05
GABPAQ06546 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.23□□□□□ -2.05
GABPAQ06546 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
GABPAQ06546 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
GABPAQ06546 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
GABPAQ06546 RNU6-78P-201ENST00000362897 107 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 RNU4-40P-201ENST00000364351 143 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 Y_RNA.255-201ENST00000364581 97 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 OR9R1P-201ENST00000412200 877 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.22□□□□□ -2.05
GABPAQ06546 EIF4EP4-201ENST00000424916 578 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.22□□□□□ -2.05
GABPAQ06546 RPL7P54-201ENST00000438336 674 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AL603825.1-201ENST00000438481 80 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.22□□□□□ -2.05
GABPAQ06546 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.22□□□□□ -2.05
GABPAQ06546 DYNLL1P5-201ENST00000467158 270 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AP001025.1-201ENST00000486139 332 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.22□□□□□ -2.05
GABPAQ06546 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.22□□□□□ -2.05
GABPAQ06546 RPS29P11-201ENST00000496507 171 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.22□□□□□ -2.05
GABPAQ06546 RNU6-548P-201ENST00000517083 115 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AP003034.1-201ENST00000534621 422 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AC136619.2-201ENST00000563361 631 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.22□□□□□ -2.05
GABPAQ06546 AGGF1P4-201ENST00000568249 801 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 MIR5583-1-201ENST00000580941 59 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 MIR5694-201ENST00000581190 76 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AC073410.2-201ENST00000603240 332 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 Z82243.1-201ENST00000609432 473 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AC004908.3-201ENST00000610248 625 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 AC073534.2-201ENST00000620377 381 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.22□□□□□ -2.05
GABPAQ06546 AC124864.2-201ENST00000624736 186 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 Z69720.2-201ENST00000624755 279 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 MIR203B-201ENST00000636080 86 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 HAUS6P2-201ENST00000433254 2404 ntBASIC2.22□□□□□ -2.05
GABPAQ06546 RNU6-529P-201ENST00000363383 104 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 RNU1-52P-201ENST00000384190 164 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 Y_RNA.480-201ENST00000384364 102 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 RNU1-57P-201ENST00000384491 166 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 Y_RNA.517-201ENST00000384551 106 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 SNORD37.1-201ENST00000390968 65 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 AL606923.1-201ENST00000406616 190 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 RNU2-20P-201ENST00000410425 191 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 MTCO3P41-201ENST00000414801 328 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.21□□□□□ -2.06
GABPAQ06546 AL591043.1-201ENST00000432461 424 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 AL354685.2-201ENST00000448218 1447 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.21□□□□□ -2.06
GABPAQ06546 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.21□□□□□ -2.06
GABPAQ06546 MTND2P33-201ENST00000506452 1031 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 MTND4P7-201ENST00000523876 130 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 CBX3P7-201ENST00000532876 502 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 PSMA3P-201ENST00000555485 635 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 AC245505.1-201ENST00000556398 224 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 RPS3AP23-202ENST00000574601 686 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 AC078795.2-201ENST00000602835 1252 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms