Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 VN1R82P-201ENST00000601481 356 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AC068790.6-201ENST00000602558 258 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AP001596.2-201ENST00000608410 312 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.33□□□□□ -2.36
HIST1H1AQ02539 MIR6788-201ENST00000618842 66 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 MTND4P21-201ENST00000453886 1357 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 OR4G2P-201ENST00000328113 903 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 RNA5SP499-201ENST00000363982 119 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 RNU6-910P-201ENST00000390844 107 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC123900.1-201ENST00000420390 96 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC244023.1-201ENST00000426884 112 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 RAB28P5-201ENST00000427490 651 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 SEPT7P5-201ENST00000434048 306 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC099677.2-201ENST00000436385 175 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC002429.1-201ENST00000437672 148 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H1AQ02539 RPL7P55-201ENST00000450522 746 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H1AQ02539 RPS26P45-201ENST00000471748 340 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC009646.1-201ENST00000510455 318 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 RN7SKP49-201ENST00000516675 260 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC092451.2-201ENST00000538746 658 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC023050.2-201ENST00000544968 387 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC090330.1-201ENST00000588646 764 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC242498.1-201ENST00000604134 111 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AL450270.1-201ENST00000606160 391 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC063943.3-201ENST00000615562 356 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC243994.1-201ENST00000618627 109 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AC007792.1-201ENST00000623023 402 ntBASIC0.32□□□□□ -2.36
HIST1H1AQ02539 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.32□□□□□ -2.36
HIST1H1AQ02539 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.31□□□□□ -2.36
HIST1H1AQ02539 AC023934.1-201ENST00000574529 2389 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 RNU6-817P-201ENST00000391083 104 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 AC013262.1-201ENST00000426710 252 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 AC098934.3-201ENST00000430450 190 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 SEPT14P24-201ENST00000447236 180 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 AC098869.1-201ENST00000481627 292 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 RNA5SP255-201ENST00000516370 107 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.31□□□□□ -2.36
HIST1H1AQ02539 MTCYBP33-201ENST00000575007 1130 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 MIR4789-201ENST00000577469 82 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 MIR5000-201ENST00000577717 103 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 AC016727.2-201ENST00000603988 621 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.31□□□□□ -2.36
HIST1H1AQ02539 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 AL158163.2-201ENST00000619110 700 ntBASIC0.31□□□□□ -2.36
HIST1H1AQ02539 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
HIST1H1AQ02539 RNU4-12P-201ENST00000365233 139 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 RNU6-1122P-201ENST00000384449 107 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 RAP1BP3-201ENST00000407180 549 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 AC016831.2-201ENST00000417179 352 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 AC092628.1-201ENST00000436250 252 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.3□□□□□ -2.36
HIST1H1AQ02539 snoU13.30-201ENST00000458951 104 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 RNU6-583P-201ENST00000516012 92 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 SNORA31.2-201ENST00000516019 134 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 AC087897.1-201ENST00000550134 156 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 AC105148.1-201ENST00000604961 409 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 KATNBL1P5-201ENST00000605015 517 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 AL353765.1-201ENST00000605514 183 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 AL451064.1-201ENST00000607718 471 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.3□□□□□ -2.36
HIST1H1AQ02539 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.3□□□□□ -2.36
HIST1H1AQ02539 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.3□□□□□ -2.36
HIST1H1AQ02539 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.3□□□□□ -2.36
HIST1H1AQ02539 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
HIST1H1AQ02539 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
HIST1H1AQ02539 RNU6-942P-201ENST00000363002 107 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 RNA5SP259-201ENST00000365541 109 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 RNU6-1235P-201ENST00000384559 107 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 SNORD65.1-201ENST00000390889 71 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 MIR942-201ENST00000401111 86 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 RNU4-27P-201ENST00000410889 139 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.29□□□□□ -2.36
HIST1H1AQ02539 MTCO3P29-201ENST00000432119 779 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 AC005094.1-201ENST00000440420 368 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.29□□□□□ -2.36
HIST1H1AQ02539 RNU6-498P-201ENST00000459468 107 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.29□□□□□ -2.36
HIST1H1AQ02539 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.29□□□□□ -2.36
HIST1H1AQ02539 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.29□□□□□ -2.36
HIST1H1AQ02539 AL512643.1-201ENST00000635735 524 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 AL079343.1-201ENST00000572358 1771 ntBASIC0.29□□□□□ -2.36
HIST1H1AQ02539 RNU6-1123P-201ENST00000362347 106 ntBASIC0.28□□□□□ -2.36
HIST1H1AQ02539 Y_RNA.224-201ENST00000364308 111 ntBASIC0.28□□□□□ -2.36
HIST1H1AQ02539 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
HIST1H1AQ02539 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.28□□□□□ -2.36
HIST1H1AQ02539 COX6CP10-201ENST00000416832 224 ntBASIC0.28□□□□□ -2.36
HIST1H1AQ02539 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.28□□□□□ -2.36
HIST1H1AQ02539 RPL39P38-201ENST00000467018 153 ntBASIC0.28□□□□□ -2.36
HIST1H1AQ02539 HMGB1P28-201ENST00000507778 552 ntBASIC0.28□□□□□ -2.36
HIST1H1AQ02539 SNORD79.1-201ENST00000516069 84 ntBASIC0.28□□□□□ -2.36
HIST1H1AQ02539 AC091163.3-201ENST00000518269 1144 ntBASIC0.28□□□□□ -2.36
HIST1H1AQ02539 AP001893.2-201ENST00000526949 202 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms