Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC060771.1-201ENST00000582031 164 ntBASIC-0□□□□□ -2.41
PRKDCP78527 AC091057.3-201ENST00000602684 733 ntBASIC-0□□□□□ -2.41
PRKDCP78527 NDUFA8P1-201ENST00000605525 367 ntBASIC-0□□□□□ -2.41
PRKDCP78527 GHRLOS.1-201ENST00000610995 70 ntBASIC-0□□□□□ -2.41
PRKDCP78527 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0□□□□□ -2.41
PRKDCP78527 AC090625.1-201ENST00000357130 210 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
PRKDCP78527 RPL26P6-201ENST00000440913 438 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 snoU13.25-201ENST00000458945 104 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 AC015724.1-201ENST00000478577 156 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 AC136619.2-201ENST00000563361 631 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 BNIP3P24-201ENST00000593398 557 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 AL109620.1-201ENST00000618738 1197 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 U2.21-201ENST00000637295 81 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
PRKDCP78527 MIRLET7D-201ENST00000362263 87 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 SNORA36.2-201ENST00000384004 127 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
PRKDCP78527 AL589872.1-201ENST00000426602 288 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 GPM6BP2-201ENST00000432046 144 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.01□□□□□ -2.41
PRKDCP78527 GPM6BP1-201ENST00000446387 144 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 AC244505.3-201ENST00000454598 187 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 AC117525.1-201ENST00000515228 503 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.01□□□□□ -2.41
PRKDCP78527 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.01□□□□□ -2.41
PRKDCP78527 AC009237.15-201ENST00000610252 501 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 AC092106.3-201ENST00000611308 722 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 MIR6134-201ENST00000617606 109 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.01□□□□□ -2.41
PRKDCP78527 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.01□□□□□ -2.41
PRKDCP78527 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.01□□□□□ -2.41
PRKDCP78527 AC138627.2-201ENST00000624202 601 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 Z99571.1-201ENST00000636677 394 ntBASIC-0.01□□□□□ -2.41
PRKDCP78527 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 MIR597-201ENST00000384968 97 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 SNORA16.2-201ENST00000390991 127 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 TAF13P2-201ENST00000416876 286 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.02□□□□□ -2.41
PRKDCP78527 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.02□□□□□ -2.41
PRKDCP78527 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.02□□□□□ -2.41
PRKDCP78527 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.02□□□□□ -2.41
PRKDCP78527 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.02□□□□□ -2.41
PRKDCP78527 MIR4764-201ENST00000580680 88 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
PRKDCP78527 RNU6-910P-201ENST00000390844 107 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AC002542.1-201ENST00000440683 193 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC-0.02□□□□□ -2.41
PRKDCP78527 AC091304.9-201ENST00000612091 226 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 MIR365A-201ENST00000362260 87 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 SNORD114-28-201ENST00000363610 72 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 MIR224-201ENST00000384889 81 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 SNORA48.1-201ENST00000390879 135 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.02□□□□□ -2.41
PRKDCP78527 AC127391.1-201ENST00000411737 98 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.02□□□□□ -2.41
PRKDCP78527 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.02□□□□□ -2.41
PRKDCP78527 FABP5P4-201ENST00000437203 171 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 BRK1P2-201ENST00000442875 223 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 MTND1P33-201ENST00000446251 917 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.02□□□□□ -2.41
PRKDCP78527 LINC01399-202ENST00000458450 244 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 RNY1P9-201ENST00000532431 109 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 MIR4782-201ENST00000577987 79 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AC091152.3-201ENST00000604227 325 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AC009950.2-201ENST00000636548 183 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AC106858.1-201ENST00000637497 429 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 RNU6-944P-201ENST00000364023 107 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 RNA5SP100-201ENST00000410903 110 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 RNA5SP59-201ENST00000410922 110 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 CCDC58P2-201ENST00000417131 366 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.02□□□□□ -2.41
PRKDCP78527 SNORA40.12-201ENST00000516329 111 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.02□□□□□ -2.41
PRKDCP78527 AL512310.8-201ENST00000550183 120 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AC025423.5-201ENST00000550230 219 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.02□□□□□ -2.41
PRKDCP78527 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.02□□□□□ -2.41
PRKDCP78527 AL671309.1-201ENST00000603750 544 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AC004853.1-201ENST00000604902 698 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AL583856.2-201ENST00000606298 543 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AP001596.2-201ENST00000608410 312 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 AC016252.1-201ENST00000609721 474 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.02□□□□□ -2.41
PRKDCP78527 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.02□□□□□ -2.41
PRKDCP78527 SNORA36.1-201ENST00000363424 132 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 SNORD114-24-201ENST00000365029 72 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.03□□□□□ -2.41
PRKDCP78527 RAC1P6-201ENST00000423911 575 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 HMGN2P34-201ENST00000437647 269 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.03□□□□□ -2.41
PRKDCP78527 LARP1BP2-201ENST00000486594 519 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.03□□□□□ -2.41
PRKDCP78527 SNORD44.1-201ENST00000363202 61 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.03□□□□□ -2.41
PRKDCP78527 AC098831.1-201ENST00000440661 216 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms