Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC134050.1-201ENST00000495088 933 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC119751.4-201ENST00000507498 357 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC005741.1-201ENST00000511094 432 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 Y_RNA.687-201ENST00000516558 91 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.75□□□□□ -2.29
HIST1H3AP68431 MTND3P13-201ENST00000574391 343 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC091135.1-201ENST00000585943 307 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 VN1R82P-201ENST00000601481 356 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 MTATP6P2-201ENST00000603319 678 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 AL365434.2-201ENST00000607979 234 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC131235.4-201ENST00000609288 620 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC027335.2-201ENST00000624030 375 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC010615.1-201ENST00000594254 1764 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
HIST1H3AP68431 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
HIST1H3AP68431 RAP1BP3-201ENST00000407180 549 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 AC123900.1-201ENST00000420390 96 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 USP9YP11-201ENST00000427537 717 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HIST1H3AP68431 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.74□□□□□ -2.29
HIST1H3AP68431 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.74□□□□□ -2.29
HIST1H3AP68431 AC108729.3-201ENST00000513484 108 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 RNU5F-2P-201ENST00000516066 82 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 SNORD116-28-201ENST00000516123 91 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 SCARNA16.2-201ENST00000516520 172 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 SNORA43.2-201ENST00000516652 128 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 RNA5SP481-201ENST00000516814 122 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 AC091163.3-201ENST00000518269 1144 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.74□□□□□ -2.29
HIST1H3AP68431 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.74□□□□□ -2.29
HIST1H3AP68431 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.74□□□□□ -2.29
HIST1H3AP68431 AL022345.2-201ENST00000606307 135 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 AL020996.3-201ENST00000606617 222 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 AL021879.1-201ENST00000611756 288 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.74□□□□□ -2.29
HIST1H3AP68431 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.74□□□□□ -2.29
HIST1H3AP68431 FRG1KP-201ENST00000623592 341 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 MIR6767-201ENST00000637302 66 ntBASIC0.74□□□□□ -2.29
HIST1H3AP68431 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.73□□□□□ -2.29
HIST1H3AP68431 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
HIST1H3AP68431 MIR373-201ENST00000362273 69 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 SNORA4.1-201ENST00000364263 144 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
HIST1H3AP68431 BTF3L4P1-201ENST00000413813 468 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.73□□□□□ -2.29
HIST1H3AP68431 AL117351.1-201ENST00000438864 766 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.73□□□□□ -2.29
HIST1H3AP68431 TOMM22P6-201ENST00000465035 409 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 SNORD60.2-201ENST00000516883 86 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 RNA5SP503-201ENST00000517047 117 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.73□□□□□ -2.29
HIST1H3AP68431 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.73□□□□□ -2.29
HIST1H3AP68431 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.73□□□□□ -2.29
HIST1H3AP68431 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.73□□□□□ -2.29
HIST1H3AP68431 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 VN1R107P-201ENST00000601784 209 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 OR4G3P-201ENST00000633500 913 ntBASIC0.73□□□□□ -2.29
HIST1H3AP68431 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
HIST1H3AP68431 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HIST1H3AP68431 RNY1P10-201ENST00000363268 113 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 RNU6-621P-201ENST00000364752 109 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 SNORA12-201ENST00000391162 147 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 RN7SKP61-201ENST00000410642 295 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.72□□□□□ -2.29
HIST1H3AP68431 RPS25P9-201ENST00000435591 252 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 Y_RNA.689-201ENST00000516589 107 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 RNU6-113P-201ENST00000516653 101 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 CYCSP23-201ENST00000519781 313 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 LRRC6P1-201ENST00000532188 885 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 BNIP3P6-201ENST00000549284 499 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 MIR4661-201ENST00000582720 75 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 AL138889.2-201ENST00000603883 242 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 AL136363.2-201ENST00000604173 851 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 AL022154.1-201ENST00000604698 785 ntBASIC0.72□□□□□ -2.29
HIST1H3AP68431 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
HIST1H3AP68431 RNA5SP432-201ENST00000362480 116 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 RNU11-5P-201ENST00000391216 129 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.71□□□□□ -2.3
HIST1H3AP68431 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.71□□□□□ -2.3
HIST1H3AP68431 AC245047.4-201ENST00000433189 144 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.71□□□□□ -2.3
HIST1H3AP68431 SNRPEP8-201ENST00000442866 260 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.71□□□□□ -2.3
HIST1H3AP68431 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.71□□□□□ -2.3
HIST1H3AP68431 AC079140.3-201ENST00000511111 550 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 AC112206.3-201ENST00000514578 389 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 RNA5SP216-201ENST00000516111 123 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms