Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL590229.1-201ENST00000603497 542 ntBASIC0.94□□□□□ -2.26
TPM4P67936 AC018889.1-201ENST00000605372 397 ntBASIC0.94□□□□□ -2.26
TPM4P67936 RNU6-88P-201ENST00000606801 100 ntBASIC0.94□□□□□ -2.26
TPM4P67936 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TPM4P67936 U6.42-201ENST00000618440 107 ntBASIC0.94□□□□□ -2.26
TPM4P67936 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
TPM4P67936 SNORA63.3-201ENST00000362682 132 ntBASIC0.93□□□□□ -2.26
TPM4P67936 SNORA63D-201ENST00000364359 132 ntBASIC0.93□□□□□ -2.26
TPM4P67936 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
TPM4P67936 AC013410.2-201ENST00000422627 201 ntBASIC0.93□□□□□ -2.26
TPM4P67936 AC108667.1-201ENST00000428618 249 ntBASIC0.93□□□□□ -2.26
TPM4P67936 AL008629.1-201ENST00000438615 184 ntBASIC0.93□□□□□ -2.26
TPM4P67936 AC007969.2-201ENST00000441891 191 ntBASIC0.93□□□□□ -2.26
TPM4P67936 AC007327.1-201ENST00000447461 264 ntBASIC0.93□□□□□ -2.26
TPM4P67936 AC079140.3-201ENST00000511111 550 ntBASIC0.93□□□□□ -2.26
TPM4P67936 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TPM4P67936 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
TPM4P67936 RN7SKP88-201ENST00000516847 250 ntBASIC0.93□□□□□ -2.26
TPM4P67936 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.93□□□□□ -2.26
TPM4P67936 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.93□□□□□ -2.26
TPM4P67936 AL391646.1-201ENST00000603860 190 ntBASIC0.93□□□□□ -2.26
TPM4P67936 AL365434.2-201ENST00000607979 234 ntBASIC0.93□□□□□ -2.26
TPM4P67936 7SK.8-201ENST00000612110 250 ntBASIC0.93□□□□□ -2.26
TPM4P67936 7SK.11-201ENST00000615477 250 ntBASIC0.93□□□□□ -2.26
TPM4P67936 7SK.13-201ENST00000622040 250 ntBASIC0.93□□□□□ -2.26
TPM4P67936 RNU6-413P-201ENST00000384115 107 ntBASIC0.92□□□□□ -2.26
TPM4P67936 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
TPM4P67936 SNORA12-201ENST00000391162 147 ntBASIC0.92□□□□□ -2.26
TPM4P67936 RAP1BP3-201ENST00000407180 549 ntBASIC0.92□□□□□ -2.26
TPM4P67936 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.92□□□□□ -2.26
TPM4P67936 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
TPM4P67936 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.92□□□□□ -2.26
TPM4P67936 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.92□□□□□ -2.26
TPM4P67936 RPL31P3-201ENST00000458430 332 ntBASIC0.92□□□□□ -2.26
TPM4P67936 snoU13.30-201ENST00000458951 104 ntBASIC0.92□□□□□ -2.26
TPM4P67936 HMGN2P9-201ENST00000476875 229 ntBASIC0.92□□□□□ -2.26
TPM4P67936 AC103851.1-201ENST00000506833 274 ntBASIC0.92□□□□□ -2.26
TPM4P67936 AC136932.1-201ENST00000574771 208 ntBASIC0.92□□□□□ -2.26
TPM4P67936 FAM71BP1-201ENST00000604431 523 ntBASIC0.92□□□□□ -2.26
TPM4P67936 AL022345.2-201ENST00000606307 135 ntBASIC0.92□□□□□ -2.26
TPM4P67936 AC072039.2-201ENST00000608883 439 ntBASIC0.92□□□□□ -2.26
TPM4P67936 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.92□□□□□ -2.26
TPM4P67936 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.92□□□□□ -2.26
TPM4P67936 AC126544.2-201ENST00000625174 749 ntBASIC0.92□□□□□ -2.26
TPM4P67936 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
TPM4P67936 RNU6-384P-201ENST00000364900 104 ntBASIC0.91□□□□□ -2.26
TPM4P67936 RNU4-22P-201ENST00000411058 166 ntBASIC0.91□□□□□ -2.26
TPM4P67936 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.91□□□□□ -2.26
TPM4P67936 RPL23AP30-201ENST00000432419 501 ntBASIC0.91□□□□□ -2.26
TPM4P67936 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.91□□□□□ -2.26
TPM4P67936 MTCO3P9-201ENST00000506989 781 ntBASIC0.91□□□□□ -2.26
TPM4P67936 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.91□□□□□ -2.26
TPM4P67936 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.91□□□□□ -2.26
TPM4P67936 CYCSP23-201ENST00000519781 313 ntBASIC0.91□□□□□ -2.26
TPM4P67936 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
TPM4P67936 VN1R80P-201ENST00000597126 338 ntBASIC0.91□□□□□ -2.26
TPM4P67936 AC091965.4-201ENST00000607691 587 ntBASIC0.91□□□□□ -2.26
TPM4P67936 AL353997.5-201ENST00000618886 171 ntBASIC0.91□□□□□ -2.26
TPM4P67936 AP000943.4-201ENST00000622912 357 ntBASIC0.91□□□□□ -2.26
TPM4P67936 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.91□□□□□ -2.26
TPM4P67936 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
TPM4P67936 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
TPM4P67936 RNU4-15P-201ENST00000362613 141 ntBASIC0.9□□□□□ -2.27
TPM4P67936 RNU6-1019P-201ENST00000364424 107 ntBASIC0.9□□□□□ -2.27
TPM4P67936 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
TPM4P67936 RNU6-1176P-201ENST00000390955 107 ntBASIC0.9□□□□□ -2.27
TPM4P67936 MTCO3P41-201ENST00000414801 328 ntBASIC0.9□□□□□ -2.27
TPM4P67936 SNRPEP8-201ENST00000442866 260 ntBASIC0.9□□□□□ -2.27
TPM4P67936 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.9□□□□□ -2.27
TPM4P67936 AC108210.2-201ENST00000503681 201 ntBASIC0.9□□□□□ -2.27
TPM4P67936 CBX3P8-201ENST00000532412 525 ntBASIC0.9□□□□□ -2.27
TPM4P67936 MIR3664-201ENST00000579074 99 ntBASIC0.9□□□□□ -2.27
TPM4P67936 AP005136.1-201ENST00000579765 429 ntBASIC0.9□□□□□ -2.27
TPM4P67936 MIR548AC-201ENST00000585049 88 ntBASIC0.9□□□□□ -2.27
TPM4P67936 RNU6-87P-201ENST00000607561 108 ntBASIC0.9□□□□□ -2.27
TPM4P67936 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
TPM4P67936 RMST_7.1-201ENST00000621935 268 ntBASIC0.9□□□□□ -2.27
TPM4P67936 OR4G3P-201ENST00000633500 913 ntBASIC0.9□□□□□ -2.27
TPM4P67936 MIR6866-201ENST00000638146 69 ntBASIC0.9□□□□□ -2.27
TPM4P67936 MIR378A-201ENST00000362177 66 ntBASIC0.89□□□□□ -2.27
TPM4P67936 MIR515-2-201ENST00000384883 83 ntBASIC0.89□□□□□ -2.27
TPM4P67936 MIR515-1-201ENST00000384884 83 ntBASIC0.89□□□□□ -2.27
TPM4P67936 ART2BP-201ENST00000453501 499 ntBASIC0.89□□□□□ -2.27
TPM4P67936 SNRPFP4-201ENST00000456366 242 ntBASIC0.89□□□□□ -2.27
TPM4P67936 RN7SL429P-201ENST00000479090 223 ntBASIC0.89□□□□□ -2.27
TPM4P67936 RN7SL489P-201ENST00000486185 223 ntBASIC0.89□□□□□ -2.27
TPM4P67936 RN7SL327P-201ENST00000488659 223 ntBASIC0.89□□□□□ -2.27
TPM4P67936 AC145146.1-201ENST00000496370 254 ntBASIC0.89□□□□□ -2.27
TPM4P67936 RNA5SP503-201ENST00000517047 117 ntBASIC0.89□□□□□ -2.27
TPM4P67936 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.89□□□□□ -2.27
TPM4P67936 AC115990.1-201ENST00000526957 301 ntBASIC0.89□□□□□ -2.27
TPM4P67936 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.89□□□□□ -2.27
TPM4P67936 AC068587.4-201ENST00000533893 186 ntBASIC0.89□□□□□ -2.27
TPM4P67936 AC144521.1-201ENST00000607148 956 ntBASIC0.89□□□□□ -2.27
TPM4P67936 AC106800.4-201ENST00000614905 153 ntBASIC0.89□□□□□ -2.27
TPM4P67936 AL359547.2-201ENST00000615810 418 ntBASIC0.89□□□□□ -2.27
TPM4P67936 RN7SL853P-201ENST00000617250 223 ntBASIC0.89□□□□□ -2.27
TPM4P67936 AL121895.2-201ENST00000619558 447 ntBASIC0.89□□□□□ -2.27
TPM4P67936 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.89□□□□□ -2.27
TPM4P67936 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms