Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL356432.1-201ENST00000405809 419 ntBASIC1.56□□□□□ -2.16
VSX2P58304 RNU2-8P-201ENST00000410727 190 ntBASIC1.56□□□□□ -2.16
VSX2P58304 HMGN1P14-201ENST00000412459 517 ntBASIC1.56□□□□□ -2.16
VSX2P58304 BTF3L4P1-201ENST00000413813 468 ntBASIC1.56□□□□□ -2.16
VSX2P58304 BX295541.1-201ENST00000417774 250 ntBASIC1.56□□□□□ -2.16
VSX2P58304 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.56□□□□□ -2.16
VSX2P58304 IFNA20P-201ENST00000436840 528 ntBASIC1.56□□□□□ -2.16
VSX2P58304 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VSX2P58304 PRELID3BP1-201ENST00000457142 540 ntBASIC1.56□□□□□ -2.16
VSX2P58304 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.56□□□□□ -2.16
VSX2P58304 AC087884.1-201ENST00000469738 328 ntBASIC1.56□□□□□ -2.16
VSX2P58304 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.56□□□□□ -2.16
VSX2P58304 AC009646.1-201ENST00000510455 318 ntBASIC1.56□□□□□ -2.16
VSX2P58304 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.56□□□□□ -2.16
VSX2P58304 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.56□□□□□ -2.16
VSX2P58304 AP000763.2-201ENST00000540641 163 ntBASIC1.56□□□□□ -2.16
VSX2P58304 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.56□□□□□ -2.16
VSX2P58304 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.56□□□□□ -2.16
VSX2P58304 HSBP1P1-201ENST00000555205 166 ntBASIC1.56□□□□□ -2.16
VSX2P58304 MIR5692A1-201ENST00000580523 69 ntBASIC1.56□□□□□ -2.16
VSX2P58304 MIR4775-201ENST00000581168 75 ntBASIC1.56□□□□□ -2.16
VSX2P58304 SNRPGP17-201ENST00000603780 214 ntBASIC1.56□□□□□ -2.16
VSX2P58304 Z99289.3-201ENST00000605586 594 ntBASIC1.56□□□□□ -2.16
VSX2P58304 AC087683.2-201ENST00000611384 326 ntBASIC1.56□□□□□ -2.16
VSX2P58304 RMST_4.1-201ENST00000616886 107 ntBASIC1.56□□□□□ -2.16
VSX2P58304 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.56□□□□□ -2.16
VSX2P58304 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
VSX2P58304 RNU6-1210P-201ENST00000363775 107 ntBASIC1.55□□□□□ -2.16
VSX2P58304 RNU6-457P-201ENST00000363999 107 ntBASIC1.55□□□□□ -2.16
VSX2P58304 RNU6-743P-201ENST00000364151 106 ntBASIC1.55□□□□□ -2.16
VSX2P58304 RNU6-282P-201ENST00000365357 103 ntBASIC1.55□□□□□ -2.16
VSX2P58304 RNU6-546P-201ENST00000383991 107 ntBASIC1.55□□□□□ -2.16
VSX2P58304 RNU6-45P-201ENST00000384471 107 ntBASIC1.55□□□□□ -2.16
VSX2P58304 MT-TH-201ENST00000387441 69 ntBASIC1.55□□□□□ -2.16
VSX2P58304 RN7SKP101-201ENST00000411376 320 ntBASIC1.55□□□□□ -2.16
VSX2P58304 MTND3P17-201ENST00000416968 344 ntBASIC1.55□□□□□ -2.16
VSX2P58304 AL365203.2-201ENST00000423444 196 ntBASIC1.55□□□□□ -2.16
VSX2P58304 AL669831.1-202ENST00000428504 417 ntBASIC1.55□□□□□ -2.16
VSX2P58304 GTF2IP13-201ENST00000438487 386 ntBASIC1.55□□□□□ -2.16
VSX2P58304 AL031667.1-201ENST00000440222 725 ntBASIC1.55□□□□□ -2.16
VSX2P58304 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.55□□□□□ -2.16
VSX2P58304 RPL39P29-201ENST00000447779 157 ntBASIC1.55□□□□□ -2.16
VSX2P58304 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.55□□□□□ -2.16
VSX2P58304 RN7SKP210-201ENST00000459176 261 ntBASIC1.55□□□□□ -2.16
VSX2P58304 snoU13.14-201ENST00000459372 104 ntBASIC1.55□□□□□ -2.16
VSX2P58304 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.55□□□□□ -2.16
VSX2P58304 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.55□□□□□ -2.16
VSX2P58304 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.55□□□□□ -2.16
VSX2P58304 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.55□□□□□ -2.16
VSX2P58304 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.55□□□□□ -2.16
VSX2P58304 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.55□□□□□ -2.16
VSX2P58304 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.55□□□□□ -2.16
VSX2P58304 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.55□□□□□ -2.16
VSX2P58304 AL356057.1-201ENST00000533798 831 ntBASIC1.55□□□□□ -2.16
VSX2P58304 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.55□□□□□ -2.16
VSX2P58304 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.55□□□□□ -2.16
VSX2P58304 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.55□□□□□ -2.16
VSX2P58304 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.55□□□□□ -2.16
VSX2P58304 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.55□□□□□ -2.16
VSX2P58304 Z84480.1-201ENST00000605131 311 ntBASIC1.55□□□□□ -2.16
VSX2P58304 AC104073.3-201ENST00000610942 955 ntBASIC1.55□□□□□ -2.16
VSX2P58304 AL773524.1-201ENST00000614065 229 ntBASIC1.55□□□□□ -2.16
VSX2P58304 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.55□□□□□ -2.16
VSX2P58304 MIR1248-201ENST00000629190 106 ntBASIC1.55□□□□□ -2.16
VSX2P58304 RNU6-1164P-201ENST00000364428 107 ntBASIC1.54□□□□□ -2.16
VSX2P58304 MIR544A-201ENST00000384855 91 ntBASIC1.54□□□□□ -2.16
VSX2P58304 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
VSX2P58304 SNORA26.8-201ENST00000391306 124 ntBASIC1.54□□□□□ -2.16
VSX2P58304 Y_RNA.595-201ENST00000410403 105 ntBASIC1.54□□□□□ -2.16
VSX2P58304 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.54□□□□□ -2.16
VSX2P58304 HSPE1P21-201ENST00000438283 308 ntBASIC1.54□□□□□ -2.16
VSX2P58304 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.54□□□□□ -2.16
VSX2P58304 AL033528.1-201ENST00000453780 140 ntBASIC1.54□□□□□ -2.16
VSX2P58304 RPL30P1-201ENST00000488676 339 ntBASIC1.54□□□□□ -2.16
VSX2P58304 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.54□□□□□ -2.16
VSX2P58304 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VSX2P58304 RNU6-1178P-201ENST00000516674 107 ntBASIC1.54□□□□□ -2.16
VSX2P58304 AC137800.2-201ENST00000574375 120 ntBASIC1.54□□□□□ -2.16
VSX2P58304 AL590229.1-201ENST00000603497 542 ntBASIC1.54□□□□□ -2.16
VSX2P58304 MIR98-201ENST00000606724 119 ntBASIC1.54□□□□□ -2.16
VSX2P58304 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
VSX2P58304 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VSX2P58304 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-37P-201ENST00000362692 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-11P-201ENST00000364234 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-715P-201ENST00000365204 103 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-25P-201ENST00000383873 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-1-201ENST00000383898 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-48P-201ENST00000384161 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-36P-201ENST00000384172 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-4P-201ENST00000384205 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-5P-201ENST00000384238 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-3P-201ENST00000384314 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-16P-201ENST00000384385 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-15P-201ENST00000384534 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-2-201ENST00000384627 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-29P-201ENST00000384637 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-9-201ENST00000384776 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-33P-201ENST00000384793 107 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms