Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.55□□□□□ -2
CLDN20P56880 RPL9P9-202ENST00000466501 579 ntBASIC2.55□□□□□ -2
CLDN20P56880 AC103975.1-201ENST00000482506 483 ntBASIC2.55□□□□□ -2
CLDN20P56880 SCARNA17.1-201ENST00000516211 143 ntBASIC2.55□□□□□ -2
CLDN20P56880 SCARNA17.2-201ENST00000516334 143 ntBASIC2.55□□□□□ -2
CLDN20P56880 RNA5SP367-201ENST00000516557 118 ntBASIC2.55□□□□□ -2
CLDN20P56880 SNORA31.18-201ENST00000517043 134 ntBASIC2.55□□□□□ -2
CLDN20P56880 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.55□□□□□ -2
CLDN20P56880 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.55□□□□□ -2
CLDN20P56880 GLYCAM1-201ENST00000546596 285 ntBASIC2.55□□□□□ -2
CLDN20P56880 FGF7P1-201ENST00000582820 288 ntBASIC2.55□□□□□ -2
CLDN20P56880 AL133215.3-201ENST00000609801 448 ntBASIC2.55□□□□□ -2
CLDN20P56880 AC090115.4-201ENST00000609970 188 ntBASIC2.55□□□□□ -2
CLDN20P56880 SCARNA17.4-201ENST00000614296 143 ntBASIC2.55□□□□□ -2
CLDN20P56880 AC097372.5-201ENST00000623665 376 ntBASIC2.55□□□□□ -2
CLDN20P56880 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CLDN20P56880 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
CLDN20P56880 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLDN20P56880 AL109809.4-201ENST00000603520 2185 ntBASIC2.54□□□□□ -2
CLDN20P56880 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLDN20P56880 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.54□□□□□ -2
CLDN20P56880 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.54□□□□□ -2
CLDN20P56880 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN20P56880 RNU6-1317P-201ENST00000364582 104 ntBASIC2.54□□□□□ -2
CLDN20P56880 RNU6-593P-201ENST00000364716 112 ntBASIC2.54□□□□□ -2
CLDN20P56880 AL139095.1-201ENST00000404326 391 ntBASIC2.54□□□□□ -2
CLDN20P56880 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.54□□□□□ -2
CLDN20P56880 AC087499.2-201ENST00000432861 149 ntBASIC2.54□□□□□ -2
CLDN20P56880 RPS3AP52-201ENST00000435639 297 ntBASIC2.54□□□□□ -2
CLDN20P56880 PCMTD1P1-201ENST00000455560 355 ntBASIC2.54□□□□□ -2
CLDN20P56880 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.54□□□□□ -2
CLDN20P56880 AC018437.1-201ENST00000492214 406 ntBASIC2.54□□□□□ -2
CLDN20P56880 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.54□□□□□ -2
CLDN20P56880 AC114801.2-201ENST00000503825 781 ntBASIC2.54□□□□□ -2
CLDN20P56880 MTND3P22-201ENST00000510932 243 ntBASIC2.54□□□□□ -2
CLDN20P56880 AC091826.1-201ENST00000514065 313 ntBASIC2.54□□□□□ -2
CLDN20P56880 RN7SKP24-201ENST00000515888 284 ntBASIC2.54□□□□□ -2
CLDN20P56880 SNORA31.6-201ENST00000516241 130 ntBASIC2.54□□□□□ -2
CLDN20P56880 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.54□□□□□ -2
CLDN20P56880 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.54□□□□□ -2
CLDN20P56880 CPDP1-201ENST00000579660 283 ntBASIC2.54□□□□□ -2
CLDN20P56880 AC090897.2-201ENST00000581715 130 ntBASIC2.54□□□□□ -2
CLDN20P56880 RPS15AP11-201ENST00000594193 385 ntBASIC2.54□□□□□ -2
CLDN20P56880 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLDN20P56880 AC096772.1-201ENST00000609146 564 ntBASIC2.54□□□□□ -2
CLDN20P56880 AL132765.2-201ENST00000610812 351 ntBASIC2.54□□□□□ -2
CLDN20P56880 AL161423.1-201ENST00000613700 262 ntBASIC2.54□□□□□ -2
CLDN20P56880 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.54□□□□□ -2
CLDN20P56880 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLDN20P56880 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CLDN20P56880 Y_RNA.151-201ENST00000363566 112 ntBASIC2.53□□□□□ -2
CLDN20P56880 Y_RNA.474-201ENST00000384341 102 ntBASIC2.53□□□□□ -2
CLDN20P56880 Y_RNA.529-201ENST00000384586 119 ntBASIC2.53□□□□□ -2
CLDN20P56880 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
CLDN20P56880 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CLDN20P56880 RPL37P10-201ENST00000412884 288 ntBASIC2.53□□□□□ -2
CLDN20P56880 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.53□□□□□ -2
CLDN20P56880 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.53□□□□□ -2
CLDN20P56880 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.53□□□□□ -2
CLDN20P56880 FABP5P14-201ENST00000437273 393 ntBASIC2.53□□□□□ -2
CLDN20P56880 AC105272.1-201ENST00000438604 198 ntBASIC2.53□□□□□ -2
CLDN20P56880 AC243964.1-201ENST00000441814 261 ntBASIC2.53□□□□□ -2
CLDN20P56880 Y_RNA.635-201ENST00000459041 101 ntBASIC2.53□□□□□ -2
CLDN20P56880 AC087190.1-201ENST00000484462 480 ntBASIC2.53□□□□□ -2
CLDN20P56880 AC116337.1-201ENST00000509680 687 ntBASIC2.53□□□□□ -2
CLDN20P56880 SMURF2P1-201ENST00000514992 481 ntBASIC2.53□□□□□ -2
CLDN20P56880 RN7SKP132-201ENST00000516001 208 ntBASIC2.53□□□□□ -2
CLDN20P56880 RNU6-612P-201ENST00000516909 102 ntBASIC2.53□□□□□ -2
CLDN20P56880 RNU1-54P-201ENST00000517181 120 ntBASIC2.53□□□□□ -2
CLDN20P56880 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN20P56880 AC079600.2-201ENST00000550076 130 ntBASIC2.53□□□□□ -2
CLDN20P56880 IMMP1LP2-201ENST00000552954 492 ntBASIC2.53□□□□□ -2
CLDN20P56880 GTF3AP2-201ENST00000557014 266 ntBASIC2.53□□□□□ -2
CLDN20P56880 RPS3AP23-202ENST00000574601 686 ntBASIC2.53□□□□□ -2
CLDN20P56880 POLR3GP2-201ENST00000588366 668 ntBASIC2.53□□□□□ -2
CLDN20P56880 AC010620.2-201ENST00000600135 313 ntBASIC2.53□□□□□ -2
CLDN20P56880 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.53□□□□□ -2
CLDN20P56880 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
CLDN20P56880 AC124303.1-201ENST00000605703 360 ntBASIC2.53□□□□□ -2
CLDN20P56880 AC009233.1-201ENST00000616477 371 ntBASIC2.53□□□□□ -2
CLDN20P56880 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.53□□□□□ -2
CLDN20P56880 AC241585.2-209ENST00000638217 143 ntBASIC2.53□□□□□ -2
CLDN20P56880 AC092593.1-201ENST00000515413 1815 ntBASIC2.53□□□□□ -2
CLDN20P56880 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.53□□□□□ -2
CLDN20P56880 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.53□□□□□ -2.01
CLDN20P56880 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN20P56880 MTND5P30-201ENST00000452896 1731 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 SNORA68.1-201ENST00000364537 132 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 Y_RNA.356-201ENST00000365475 113 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 SNORD21-201ENST00000383953 95 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 RNU6-790P-201ENST00000384479 105 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 MIR517A-201ENST00000385001 87 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AL133475.1-201ENST00000404414 305 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AL513475.1-201ENST00000406602 315 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AP000275.1-201ENST00000411943 390 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 DAP3P1-201ENST00000441522 278 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AC009296.1-201ENST00000443146 155 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 Z96811.1-201ENST00000445880 108 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms