Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6-78P-201ENST00000362897 107 ntBASIC2.24□□□□□ -2.05
PEX3P56589 RNU6-487P-201ENST00000365430 104 ntBASIC2.24□□□□□ -2.05
PEX3P56589 MIR548F1-201ENST00000408667 84 ntBASIC2.24□□□□□ -2.05
PEX3P56589 Y_RNA.599-201ENST00000410489 109 ntBASIC2.24□□□□□ -2.05
PEX3P56589 MTCO1P20-201ENST00000425366 358 ntBASIC2.24□□□□□ -2.05
PEX3P56589 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.24□□□□□ -2.05
PEX3P56589 SRIP2-201ENST00000428470 166 ntBASIC2.24□□□□□ -2.05
PEX3P56589 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.24□□□□□ -2.05
PEX3P56589 AL513124.1-201ENST00000450410 614 ntBASIC2.24□□□□□ -2.05
PEX3P56589 MTND3P16-201ENST00000452205 344 ntBASIC2.24□□□□□ -2.05
PEX3P56589 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.24□□□□□ -2.05
PEX3P56589 AL121769.1-201ENST00000469473 401 ntBASIC2.24□□□□□ -2.05
PEX3P56589 AC091885.1-201ENST00000506658 268 ntBASIC2.24□□□□□ -2.05
PEX3P56589 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.24□□□□□ -2.05
PEX3P56589 RNU5B-3P-201ENST00000516601 115 ntBASIC2.24□□□□□ -2.05
PEX3P56589 SNORD60.2-201ENST00000516883 86 ntBASIC2.24□□□□□ -2.05
PEX3P56589 BTF3P12-201ENST00000519620 469 ntBASIC2.24□□□□□ -2.05
PEX3P56589 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.24□□□□□ -2.05
PEX3P56589 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.24□□□□□ -2.05
PEX3P56589 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.24□□□□□ -2.05
PEX3P56589 AC023050.3-201ENST00000541142 333 ntBASIC2.24□□□□□ -2.05
PEX3P56589 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.24□□□□□ -2.05
PEX3P56589 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.24□□□□□ -2.05
PEX3P56589 AP003465.2-201ENST00000602571 373 ntBASIC2.24□□□□□ -2.05
PEX3P56589 RNU6-91P-201ENST00000607774 107 ntBASIC2.24□□□□□ -2.05
PEX3P56589 AC103705.1-201ENST00000619013 241 ntBASIC2.24□□□□□ -2.05
PEX3P56589 AC073869.6-201ENST00000640656 341 ntBASIC2.24□□□□□ -2.05
PEX3P56589 AP000553.5-201ENST00000641933 54 ntBASIC2.24□□□□□ -2.05
PEX3P56589 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.24□□□□□ -2.05
PEX3P56589 MTND4P14-201ENST00000435799 1354 ntBASIC2.23□□□□□ -2.05
PEX3P56589 HAUS6P2-201ENST00000433254 2404 ntBASIC2.23□□□□□ -2.05
PEX3P56589 Y_RNA.9-201ENST00000362354 101 ntBASIC2.23□□□□□ -2.05
PEX3P56589 Y_RNA.231-201ENST00000364358 102 ntBASIC2.23□□□□□ -2.05
PEX3P56589 Y_RNA.256-201ENST00000364594 104 ntBASIC2.23□□□□□ -2.05
PEX3P56589 RNA5SP160-201ENST00000364866 120 ntBASIC2.23□□□□□ -2.05
PEX3P56589 Y_RNA.378-201ENST00000365652 113 ntBASIC2.23□□□□□ -2.05
PEX3P56589 Y_RNA.402-201ENST00000383972 102 ntBASIC2.23□□□□□ -2.05
PEX3P56589 RNU6-622P-201ENST00000384272 103 ntBASIC2.23□□□□□ -2.05
PEX3P56589 RNU6-843P-201ENST00000384454 104 ntBASIC2.23□□□□□ -2.05
PEX3P56589 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
PEX3P56589 UBE2V1P8-201ENST00000437166 265 ntBASIC2.23□□□□□ -2.05
PEX3P56589 AC013470.1-201ENST00000453438 462 ntBASIC2.23□□□□□ -2.05
PEX3P56589 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.23□□□□□ -2.05
PEX3P56589 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PEX3P56589 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.23□□□□□ -2.05
PEX3P56589 SNORA31.23-201ENST00000517219 133 ntBASIC2.23□□□□□ -2.05
PEX3P56589 HSPE1P18-201ENST00000517602 280 ntBASIC2.23□□□□□ -2.05
PEX3P56589 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.23□□□□□ -2.05
PEX3P56589 COPS8P3-201ENST00000526024 482 ntBASIC2.23□□□□□ -2.05
PEX3P56589 MIR3941-201ENST00000582572 103 ntBASIC2.23□□□□□ -2.05
PEX3P56589 VN1R80P-201ENST00000597126 338 ntBASIC2.23□□□□□ -2.05
PEX3P56589 AL356280.1-201ENST00000603614 379 ntBASIC2.23□□□□□ -2.05
PEX3P56589 APOOP1-201ENST00000604695 592 ntBASIC2.23□□□□□ -2.05
PEX3P56589 AL121917.1-203ENST00000605534 577 ntBASIC2.23□□□□□ -2.05
PEX3P56589 RMST_3.1-201ENST00000611651 109 ntBASIC2.23□□□□□ -2.05
PEX3P56589 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
PEX3P56589 AC024581.2-201ENST00000619986 252 ntBASIC2.23□□□□□ -2.05
PEX3P56589 MIR3688-2-201ENST00000636963 87 ntBASIC2.23□□□□□ -2.05
PEX3P56589 AC080128.1-201ENST00000474389 1917 ntBASIC2.23□□□□□ -2.05
PEX3P56589 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
PEX3P56589 AC121333.1-201ENST00000567488 2709 ntBASIC2.22□□□□□ -2.05
PEX3P56589 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PEX3P56589 RNU1-72P-201ENST00000362976 153 ntBASIC2.22□□□□□ -2.05
PEX3P56589 MIR1261-201ENST00000408659 82 ntBASIC2.22□□□□□ -2.05
PEX3P56589 SNORD56-201ENST00000413522 71 ntBASIC2.22□□□□□ -2.05
PEX3P56589 SNRPEP10-201ENST00000420249 274 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.22□□□□□ -2.05
PEX3P56589 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.22□□□□□ -2.05
PEX3P56589 AL021397.1-201ENST00000451806 248 ntBASIC2.22□□□□□ -2.05
PEX3P56589 RNU6-1208P-201ENST00000459588 107 ntBASIC2.22□□□□□ -2.05
PEX3P56589 HMGN2P26-201ENST00000463169 339 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC117503.1-201ENST00000472241 394 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC090096.1-201ENST00000489168 390 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC018437.1-201ENST00000492214 406 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
PEX3P56589 Y_RNA.654-201ENST00000497848 106 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.22□□□□□ -2.05
PEX3P56589 SNORA14.1-201ENST00000516113 141 ntBASIC2.22□□□□□ -2.05
PEX3P56589 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PEX3P56589 AP003033.1-201ENST00000527244 415 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC079598.5-201ENST00000547460 117 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.22□□□□□ -2.05
PEX3P56589 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.22□□□□□ -2.05
PEX3P56589 AC136619.2-201ENST00000563361 631 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.22□□□□□ -2.05
PEX3P56589 RPS15AP11-201ENST00000594193 385 ntBASIC2.22□□□□□ -2.05
PEX3P56589 BNIP3P25-201ENST00000596023 559 ntBASIC2.22□□□□□ -2.05
PEX3P56589 RNU6-89P-201ENST00000606519 100 ntBASIC2.22□□□□□ -2.05
PEX3P56589 U2.17-201ENST00000611454 95 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AC026585.1-201ENST00000619582 524 ntBASIC2.22□□□□□ -2.05
PEX3P56589 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.22□□□□□ -2.05
PEX3P56589 AC244517.12-201ENST00000623581 663 ntBASIC2.22□□□□□ -2.05
PEX3P56589 U4.7-201ENST00000638126 106 ntBASIC2.22□□□□□ -2.05
PEX3P56589 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
PEX3P56589 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PEX3P56589 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
PEX3P56589 OR4G1P-203ENST00000641984 1631 ntBASIC2.21□□□□□ -2.06
PEX3P56589 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PEX3P56589 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.21□□□□□ -2.06
PEX3P56589 RNU6-534P-201ENST00000364877 106 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms